Pairwise Alignments

Query, 356 a.a., Multidrug resistance protein MdtN from Xanthobacter sp. DMC5

Subject, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (257), Expect = 8e-27
 Identities = 97/360 (26%), Positives = 160/360 (44%), Gaps = 34/360 (9%)

Query: 17  KKTLGLAVSLAALAGAVLFGWSYVRNATLNPLSQDAVITADTVNIAAAVPGRIAAIHAAE 76
           K  LGLA ++    G+    W ++ +  ++  + +A   A+   +  AV G IA ++  +
Sbjct: 32  KGFLGLAAAIVVAGGSYALYWHFIGSRYIS--TDNAYAAAEIAEVTPAVGGIIAQVNVVD 89

Query: 77  NGSVRKGELLFALDATTYRLQAEQAAADLKIAEAALADRRRS-------IAAEQSNAIIA 129
              V++G++L  LD T  RL   QA ADL +A+  +     +       + A+++N    
Sbjct: 90  TEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRV 149

Query: 130 QEQVARARSNLDLASQTLARLEALRPKGYVSAQQVDDAATAKRDAEISLKQA----LQQQ 185
           + Q+  A+++ + A   L+R E L   G VS +++ +A T    A+ +L  A     Q Q
Sbjct: 150 KAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQ 209

Query: 186 AAADALVSNAAAAAAVVD-----------ARRAALALAERGLADTEVRAPFDGKVVGLDQ 234
           A   + + +  A AA+ D             +A    A+  L  T +RAP  G V     
Sbjct: 210 ATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQV 269

Query: 235 SPGGFVISGQSLFTLINTDAWFASAAFVETELPGIEVGNCATVYT-LADRTRLIRGRVEG 293
             G  V  G  L T++ TD  +  A F E EL  ++VG   T+   L        G V G
Sbjct: 270 QVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAG 329

Query: 294 IGWGITAQEIINLPFKM-PIVPKSLDWVRVAQRFPVRVRL--IDPPAGLMRVGASATVTV 350
              G  +       F M P    + +W++V QR P+R+ L   D  A  ++VG S   T+
Sbjct: 330 FSGGTGSA------FSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATI 383