Pairwise Alignments

Query, 279 a.a., Inner membrane ABC transporter permease protein YcjP from Xanthobacter sp. DMC5

Subject, 266 a.a., Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (313), Expect = 1e-33
 Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 1/249 (0%)

Query: 29  PIYWMVVSSTRAPQALINSTSLLPGPFTWEYYTNLLELTDYPSQFLNSLIVAAVTVVVTM 88
           PIYW++  S ++   ++ S +L P  FT+  Y  +     + + +LNSL   ++  V+++
Sbjct: 19  PIYWLLNMSFKSNTEILGSLTLWPQDFTFHNYKVIFTDPSWYTGYLNSLYYVSLNTVISL 78

Query: 89  VFSIMIAYAVTRHRIRGKGIIVGAMLYAYMFPPLLIAIPMFSIFAKLGLGDTLTSVIVSH 148
             ++  AYA +R+R  G   +   +L   M PP +  +P F +++ +GL DT  +V ++H
Sbjct: 79  GVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFLLPFFQLYSSIGLFDTHIAVALAH 138

Query: 149 LTLTLPLGVWFLWGFFKSMPFELEEAAMVDGCTRLGAFLRVVLPLSLPGLITVAIFSFLL 208
               +PL VW L GF   +P E++E A +DG +    F ++ +PL   G+   A F F+ 
Sbjct: 139 CLFNVPLAVWILEGFMSGVPKEIDETAYIDGYSFPKFFAKIFIPLIGSGIGVTAFFCFMF 198

Query: 209 SWTDYTYALIMIGSDANKTVPVGLASMVGSFDLRWGEIMAGSTLIALPLFGAFALLSQYF 268
           SW +   A  +   +A K +   +   V +  + WG + A   L  LP       +  + 
Sbjct: 199 SWVELLLARTLTSVNA-KPIAAVMTRTVSASGIDWGVLAAAGVLTILPGMLVIWFVRNHV 257

Query: 269 IQGLGAGAV 277
            +G   G V
Sbjct: 258 AKGFALGRV 266