Pairwise Alignments

Query, 279 a.a., Inner membrane ABC transporter permease protein YcjP from Xanthobacter sp. DMC5

Subject, 281 a.a., ABC transporter for D-Glucosamine, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  134 bits (337), Expect = 2e-36
 Identities = 91/288 (31%), Positives = 150/288 (52%), Gaps = 16/288 (5%)

Query: 1   MTRSSPRSLAGRVALYAAATLIAVYSAFPIYWMVVSSTRAPQALINSTSLL--PGPFTWE 58
           M R SP      V ++A+A L+AV    P+ W+++ S  +P A +++  L   P      
Sbjct: 1   MERQSPLF---SVFIHASALLLAVVILAPVAWLLIMSI-SPAADLSAKPLAWWPSDIDLS 56

Query: 59  YYTNLLELTD------YPSQFLNSLIVAAVTVVVTMVFSIMIAYAVTRHRIRGKGIIVGA 112
            Y  LL   +      + +  LNS+ VA +  +  +V ++  A+AV+R       +   A
Sbjct: 57  RYRTLLSAVENSAGAAFIASLLNSIKVAGMATLAAVVVAVPAAWAVSRTPAVAWSLY--A 114

Query: 113 MLYAYMFPPLLIAIPMFSIFAKLGLGDTLTSVIVSHLTLTLPLGVWFLWGFFKSMPFELE 172
           ++  YM PP+ +A+P++   A  GL +++  + + +LT+  P   W L   F S+P E+E
Sbjct: 115 VIATYMLPPVALAVPLYMGLAYFGLLNSVFGLALVYLTILAPFTTWLLKSGFDSIPREIE 174

Query: 173 EAAMVDGCTRLGAFLRVV-LPLSLPGLITVAIFSFLLSWTDYTYALIMIGSDANKTVPVG 231
            AAM+DG  RL   LR++ LPL+ P + T A+F+FLL+W ++ YAL+       KT+ V 
Sbjct: 175 SAAMIDGA-RLDQILRILTLPLAAPVMATSALFAFLLAWDEFFYALLFTSDQRAKTLTVA 233

Query: 232 LASMVGSFDLRWGEIMAGSTLIALPLFGAFALLSQYFIQGLGAGAVKG 279
           +A + G     +G I     L ALP      ++ +  I GL +G VKG
Sbjct: 234 IADLAGGRVSDYGLIATAGVLAALPPVLIGLIMQRALISGLTSGGVKG 281