Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator RhaR from Xanthobacter sp. DMC5

Subject, 249 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score = 65.9 bits (159), Expect = 9e-16
 Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 17/198 (8%)

Query: 101 ADIETGFDFFLLEVSHGALHQTFTEMGLPLAECVSCTPGTQDPVLAHLSRALLPMLEAP- 159
           A    GF + +  +    + Q      LP  E       + DP L   +R LL  L+ P 
Sbjct: 60  AGTNEGFRYRMFYIEPSVIQQVLGGKPLPFIEGGL----SNDPRLNIATRRLLNGLDHPL 115

Query: 160 ---ERQVPLFLDQVVSAIQTHLATRYHGAAVRIPGGLSPRQFAIAKERLAAGLDGNVLIS 216
              E +  ++   +  A+     +R     +  P     R F      +   L   + + 
Sbjct: 116 DPLEEEDAIY--DLAQALDIAAGSRRGRRLIDYPAAERARLF------IHDALQQTITLD 167

Query: 217 DIAAACGVSRGHFIKCFRDETGLTPYQWMLHLRVERARNLIVGSRLPLADIAITCGFSDQ 276
           D+  A G  R    + FR   G +PY+++   R+  AR L+    +PL+++A+ CGF DQ
Sbjct: 168 DLVQASGRDRWSLSRDFRALYGTSPYRYITQRRLNEARRLVFHG-IPLSEVALACGFFDQ 226

Query: 277 SHMTRTFTRLTGSAPGLW 294
           SHMTR  T+  G +P  W
Sbjct: 227 SHMTRLHTQAFGISPARW 244