Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator RhaR from Xanthobacter sp. DMC5

Subject, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 66.6 bits (161), Expect = 6e-16
 Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 6/129 (4%)

Query: 168 DQVVSAIQTHLATRYHGAAVRIPGGLSPRQFAIAKERLAAGLDGNVLISDIAAACGVSRG 227
           D VV+ +Q H++      A+      S     +    +   L   + ++ +A +  +S  
Sbjct: 159 DTVVALLQRHIS------ALASVHKESRFDMEVVDRYIEQHLAHRISVAQLAGSVFLSES 212

Query: 228 HFIKCFRDETGLTPYQWMLHLRVERARNLIVGSRLPLADIAITCGFSDQSHMTRTFTRLT 287
            F   F+++ GLTP+Q++L+ RV+ A+ LI   RL L  +A   GFS+QS  T TF+RL 
Sbjct: 213 QFHVLFKEQMGLTPHQYVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQSTFTHTFSRLH 272

Query: 288 GSAPGLWRR 296
           G +P  ++R
Sbjct: 273 GISPSQYKR 281