Pairwise Alignments

Query, 543 a.a., DNA ligase from Xanthobacter sp. DMC5

Subject, 562 a.a., ATP-dependent DNA ligase from Pseudomonas fluorescens FW300-N2C3

 Score =  306 bits (783), Expect = 2e-87
 Identities = 218/582 (37%), Positives = 299/582 (51%), Gaps = 61/582 (10%)

Query: 1   MNRFAALLDRMSYEAGRNAKIRLMADYFRSTPDPERGLALAALTGALSFANAKPGLVRTL 60
           M  FA L   +      NAK+  M DYF   P  +   A+  L+G          ++R L
Sbjct: 1   MKAFAELYAELDATTSSNAKLTAMQDYFSKAPPQDAAWAVYFLSGGRPRQLVPVKILREL 60

Query: 61  IAERADPV---LFEMSYDYVGDLSETVALMWPR-PEGAQPHAPL-LSEIVHGLSTFSKVS 115
            A R   +   LFE SY  VGDL+ET++L+ P  P  +     L + E +  L   S   
Sbjct: 61  -AVRVSGLSLWLFEESYQAVGDLAETISLVLPESPHSSDEGLALWIEEKLLPLRGESPDV 119

Query: 116 LPRHLADWLDGLDETGRWALLKLITGSMRVGASARLAKTAVASLGAVTPDEVGLVWPGLE 175
           L   L      LD       +KLITGS RVG S  L   A+A++  +    V     G  
Sbjct: 120 LTERLPALWAQLDRPSLMLCIKLITGSFRVGVSKLLVTRALATMAGLDSKRVAQRLVGYT 179

Query: 176 P--------PYEELFAWVEGRGPRPETSNPAPFRPVMLAHA----IEEADFTTLDPAA-F 222
                     Y +L A             P PF    LAHA    +E+ D   L PA+ +
Sbjct: 180 DLSHRPTAASYLKLIAAESDDEHAQRGGQPYPF---FLAHALSAPVEQFD-ALLGPASDW 235

Query: 223 SAEWKWDGIRVQAVAGTGPDGVRVVRLYSRTGEDISDAFPDM---AEAITFDGAMDGELL 279
             EWKWDGIR Q +   G      + ++SR  + +++ FP++   A+A+     +DGE++
Sbjct: 236 QVEWKWDGIRAQVIKRDGH-----LWVWSRGEDLVTERFPELHSLAQALPDGTVIDGEIV 290

Query: 280 IVRDGR----------------VEPFNVLQQRLNRKTVTVKMLAEFPAHIRAYDLLVDGT 323
           + +  +                V+PF +LQQR+ RKT+  K+L + P  + AYDLL    
Sbjct: 291 VWKAPQSVTEDAFDPDAPLQPAVQPFALLQQRIGRKTLGKKILDDAPVVVMAYDLLEWQG 350

Query: 324 DDLREQPFAARRARLEALVARLQTPRIDLSPMVPFSTWEDLTAARRDPASAGAGADAGAV 383
           +D R +P A RR +LEAL+ R+ +P +  SP++    W DL   R    S G       V
Sbjct: 351 EDWRSRPQAERREQLEALIGRIHSPVLLPSPIITGQDWLDLARQREASRSLG-------V 403

Query: 384 EGVMIKRADSPYLPGRPK--GPWWKWKRDPHTVDAVLMYAQRGHGKRSSFYSDYTFGVW- 440
           EG+M+K  D+ Y  GR K  G WWKWK DP +VDAVL+YAQRGHG+R+S YSDYTF VW 
Sbjct: 404 EGMMLKARDALYGVGRTKDMGVWWKWKIDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWD 463

Query: 441 TQSEEGEDVLVPVGKAYFGFTDEELKQIDAFVRRATINRFGPVREVVHEKDEGLVLEVAF 500
              +  E  LVP  KAY G TD E++Q+D+ VR+ T+ +FGPV  V       LV E+ F
Sbjct: 464 NPPDTRERTLVPFAKAYSGLTDAEMRQVDSIVRKTTVEKFGPVSSVT----PTLVFELGF 519

Query: 501 EGLARSTRHRSGIAMRFPRIARLRWDKPPGEADRLETLEALL 542
           EG+A S RH+SGIA+RFPR+ R R DK   EAD L TL+ +L
Sbjct: 520 EGIALSKRHKSGIAVRFPRMLRWRQDKGVDEADTLATLQDML 561