Pairwise Alignments

Query, 543 a.a., DNA ligase from Xanthobacter sp. DMC5

Subject, 507 a.a., Probable ATP-dependent DNA ligase LigB (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) from Mycobacterium tuberculosis H37Rv

 Score =  126 bits (317), Expect = 2e-33
 Identities = 141/487 (28%), Positives = 204/487 (41%), Gaps = 65/487 (13%)

Query: 84  VALMWPRPEGAQPHAPLLSEIVHGL-STFSKV-SLPRH---------LADWLDGLDETGR 132
           + + W       P AP  +  V G+ +T SK+ +LP           +A+      E  +
Sbjct: 56  IGVGWAALRSLPPPAPQPALTVTGVDATLSKIGTLPGKGSQAQRAALVAELFSAATEAEQ 115

Query: 133 WALLKLITGSMRVGASARLAKTAVAS---LGAVTPDEVGLVW--------PGLEPPYEEL 181
             LL+L+ G +R GA   +   AVA    L A T     ++          GL     + 
Sbjct: 116 TFLLRLLGGELRQGAKGGIMADAVAQAAGLPAATVQRAAMLGGDLAAAAAAGLSGAALDT 175

Query: 182 FAWVEGRGPRPETSNPAPFRPVMLAHAIEEADFTTLDPAAFSAEWKWDGIRVQAVAGTGP 241
           F    GR   P  +  A      +  A+E    TT+  A      K DG RVQ       
Sbjct: 176 FTLRVGRPIGPMLAQTA----TSVHDALERHGGTTIFEA------KLDGARVQIHRANDQ 225

Query: 242 DGVRVVRLYSRTGEDISDAFPDMAEAITF----DGAMDGELL-IVRDGRVEPFNVLQQRL 296
                VR+Y+R+ +D++   P++ EA       D   DGE + +  D R + F V   R 
Sbjct: 226 -----VRIYTRSLDDVTARLPEVVEATLALPVRDLVADGEAIALCPDNRPQRFQVTASRF 280

Query: 297 NRKTVTVKMLAEFPAHIRAYDLLVDGTDDLREQPFAARRARLEALV-ARLQTPRIDLSPM 355
            R        A  P  +  +D+L     DL E P   R A L+ALV AR +  R+  S  
Sbjct: 281 GRSVDVAAARATQPLSVFFFDILHRDGTDLLEAPTTERLAALDALVPARHRVDRLITSDP 340

Query: 356 VPFSTWEDLTAARRDPASAGAGADAGAVEGVMIKRADSPYLPGRPKGPWWKWKRDPHTVD 415
              + + D T A                EGVM K   + YL GR +G  W   +  HT+D
Sbjct: 341 TDAANFLDATLA-------------AGHEGVMAKAPAARYLAGR-RGAGWLKVKPVHTLD 386

Query: 416 AVLMYAQRGHGKRSSFYSDYTFGVWTQSEEGEDVLVPVGKAYFGFTDEELK-QIDAFVRR 474
            V++  + G G+R    S+   G    +  G    V VGK + G TD  L  Q   F   
Sbjct: 387 LVVLAVEWGSGRRRGKLSNIHLGARDPATGG---FVMVGKTFKGMTDAMLDWQTTRFHEI 443

Query: 475 ATINRFGPVREVVHEKDEGLVLEVAFEGLARSTRHRSGIAMRFPRIARLRWDKPPGEADR 534
           A     GP    V +     V+EVA +G+ RS+R+  G+A+RF R+ R R DK P EAD 
Sbjct: 444 AV----GPTDGYVVQLRPEQVVEVALDGVQRSSRYPGGLALRFARVVRYRADKDPAEADT 499

Query: 535 LETLEAL 541
           ++ + AL
Sbjct: 500 IDAVRAL 506