Pairwise Alignments

Query, 543 a.a., DNA ligase from Xanthobacter sp. DMC5

Subject, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

 Score =  106 bits (265), Expect = 2e-27
 Identities = 99/358 (27%), Positives = 169/358 (47%), Gaps = 32/358 (8%)

Query: 199 PFRPVM--LAHAIEEADFTTLDPAAFSAEWKWDGIRVQAVAGTGPDGVRVVRLYSRTGED 256
           P +P++  L  +IE+A   T  P     E K+DG RVQ     G      V++YSR  E+
Sbjct: 225 PIKPMLAQLTPSIEDAMIETKMP---QFETKYDGARVQVHKSNGD-----VKIYSRRLEN 276

Query: 257 ISDAFPDMAEAIT---FDGA-MDGELLIVR--DGRVEPFNVLQQRLNRKTVTVKMLAEFP 310
           I+++ P++ E I     D   ++GE + +    G+  PF  + +R  RK    KM  +  
Sbjct: 277 ITNSVPELVEEIKKLDIDNIILEGECVAMDLDSGKPRPFQDILRRFRRKYNIDKMAEKIA 336

Query: 311 AHIRAYDLLVDGTDDLREQPFAARRARLEALV------ARLQTPRIDL-SPMVPFSTWED 363
             I  +D+L      L + P   RR  LE L       + L+  + ++ S  + FS+++ 
Sbjct: 337 LRIYFFDVLYYNRG-LIDTPLKTRREILEKLFGTNNWDSELEKIKKEIFSSKMLFSSFKL 395

Query: 364 LTAARRDPASAGAGADAGAVEGVMIKRADSPYLPGRPKGPWWKWKRDPHTVDAVLMYAQR 423
            +            + +   EG+MIK  D+PY PG      +K K     +D V+  A+ 
Sbjct: 396 NSGDPNLVKEFFNWSLSIGHEGIMIKNPDAPYTPGSRVKTMYKVKPTLENLDVVVTRAKI 455

Query: 424 GHGKRSSFYSDYTFGVWTQSEEGEDVLVPVGKAYFGFTDEELKQIDAFVRRATINRFGPV 483
           G GKR  +Y  Y   V    ++ +  L  +G    G T+++L+++   V    I   G  
Sbjct: 456 GMGKRKDWYGSYELSV----KDNDGNLHVIGNVGSGLTEDDLEKLTKIVNEIKIEDLG-- 509

Query: 484 REVVHEKDEGLVLEVAFEGLARSTRHRSGIAMRFPRIARLRWDKPPGEADRLETLEAL 541
            EV+ E    +VLEV +E +  S ++  G A+RFPR+ ++R DK   + + L+ ++ +
Sbjct: 510 EEVILEPK--IVLEVTYEEIQTSEKYEMGYALRFPRVVQIREDKSINDINTLDDVKKI 565