Pairwise Alignments

Query, 1021 a.a., Multidrug export protein AcrF from Xanthobacter sp. DMC5

Subject, 1024 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  538 bits (1385), Expect = e-156
 Identities = 313/1023 (30%), Positives = 561/1023 (54%), Gaps = 16/1023 (1%)

Query: 5    NLSDWALEHRSLVWYFMLAFVLAGFMSYLQLGREEDPAFTIKTMVIQAQWPGASAQEMTR 64
            N +++++ H+ + W F L  ++ G +S++ LG+ E P FTIK  ++   +PGAS +++  
Sbjct: 2    NFAEYSITHKVVSWMFALLLLIGGSLSFMSLGQLEFPEFTIKEALVVTAYPGASPEQVEE 61

Query: 65   QVTDRIEKKLEELEALDYTRSLTVPGQTTIFVNLRDTTKARDVVPTWLQVRNMVNDIRGT 124
            +VT  +E  L++L+ + +  S+   G + I + + D   A  +   W  VR  V+D +G+
Sbjct: 62   EVTLPLEDALQQLDGVKHITSINSAGLSQIQIEMEDKYDAEKLPQIWDLVRRKVSDTQGS 121

Query: 125  FPQGVTGPQFNDRFGDVYGNIYAFTSDGLTQRQLRDRVEEVRAQVLTVPNVGRVDIIGAQ 184
             P G   PQ  D FGDVYG +   + DG ++R+L +  + +R +++ V  + RV+I G  
Sbjct: 122  LPSGAMTPQVIDDFGDVYGILLNLSGDGYSERELENYADFLRRELVLVDGIKRVNIAGIV 181

Query: 185  DEVIFLEFSTRKMAALDIDQRAVLSSLQAQNALVPSGVLQAGPERIAVRVNGRFSSEESL 244
            D+ + +E ST+K+ AL ++Q  +   + +QN +  +G ++ G  RI +   G F S E+L
Sbjct: 182  DQQVVVEISTQKINALGLNQDYIYGLINSQNVVSNAGSIRVGDNRIRIHPTGEFDSVEAL 241

Query: 245  KAINLRING--RFFPLTDIATIRRGYVDPPQSLFRFNGEPAIGLAIGMKAGANLLQFGEA 302
              + +   G  +   L DIA I +   + P +L+   G+ A+ + I   +G N+++ GEA
Sbjct: 242  SRLVVSAPGSAKLIYLGDIANIYKAMDETPSNLYHSGGDMALSVGIAFSSGVNVVKVGEA 301

Query: 303  LKAEMTRIEADLPVGVGVHLVSDQPQIVEEAVGGFTRALMEAVIIVLAISFVSLGLRAGL 362
            +  +M  +  +LPVG+ +  V DQ ++V++ + GF   L E++ IV+ +  + +GLR+GL
Sbjct: 302  VNQKMMALSDELPVGMMLTTVYDQSKMVDQTINGFLVNLAESIAIVIGVLLIFMGLRSGL 361

Query: 363  VVAISIPLVLAITFMVMAYTGISLQRISLGALIIALGLLVDDAMIAVEMMVARLEAGDTL 422
            ++ + + L +  TF++M    I LQ ISLGALIIALG+LVD+A++  E ++  L+ G + 
Sbjct: 362  LMGLVLLLTILGTFIMMKVLNIELQIISLGALIIALGMLVDNAIVVTEGIIIGLKRGQSR 421

Query: 423  RKAATYVYTSTAFPMLSGTLVTVAGFIPIGLNNSNAGEFTFTLFVVIAVSLLVSWLVAVL 482
             + A  V T T +P+L  T++ +  F PIGL+++  GEF  +LF+V+ +SL +SW+ A+ 
Sbjct: 422  LETAKQVITQTQWPLLGATVIAIIAFAPIGLSDNATGEFCISLFLVLLISLFISWITAMT 481

Query: 483  FTPLL-GVAILPKSLPHHKEGG---GRFARAFAWILKRAMLWRWTTIGVTVLVFILSLAG 538
             TP    +      +P   +     G   + +   L  AM +R  T+ V +L  + S+ G
Sbjct: 482  LTPFFCDLLFKDGEIPDEADSDPYKGWLFQLYRGSLSLAMRFRGLTLLVVLLALVGSVMG 541

Query: 539  MGLVQQQFFPSSDRRELIVDWNLPQNASIAETNAQMARFEQEVL----KGNPDIDHWSTY 594
             G V+  FFP+S+     VD  +P+ + I  T A + R EQ+++    K +  + + ++ 
Sbjct: 542  FGQVKNVFFPASNTPIFFVDVWMPEGSDIKATEALLGRIEQDLMAEQEKQDLGLVNITSV 601

Query: 595  VGTGAPRFVLPVDVQPADVAFGQTIIVTKGLEERNRLKGQFQAYLDKAMPGTDAFVHFLD 654
            VG GA RFVLP   +    A+GQ +I    LE  N    + +  L +  P  +    +++
Sbjct: 602  VGQGAQRFVLPYVPEKGYAAYGQLLIEMSNLETLNAYMRRLEQDLVQHYPEAEYRFKYME 661

Query: 655  IGPPVGRPVQYRVSGPDIQQVRTYALDFASVMRGNPHLGNVVFDWMEPARVIKVDVLQDK 714
             GP     ++ R  G D + +R  A   + +    P   +V  +W     +++  +   +
Sbjct: 662  NGPSPAAKIEARFYGEDPEVLRQLAQQASEIFLAEPSATSVRHNWRNQVTLVRPQLALAQ 721

Query: 715  ARQLGVTSEDIAGALNGVLDGTAITQVRDDIYLVTVLGRANAQERQSIETLRDLQLPGSG 774
            AR+ G++ +D+  AL     G  +   R++ +L+ ++ RA A ER + +++  LQ+  + 
Sbjct: 722  ARETGISKQDLDNALLTNFSGKHVGLYRENSHLLPIIARAPADERLNADSISALQVWSTE 781

Query: 775  GR-SVPLA-AVATLRYEIEQPTIWRRSRLPTITAKAGIID--TAQPNTVVEQLTPAVAAF 830
                VP++  V+    E E P I RR R   I+  A  ++      ++V  +L P V A 
Sbjct: 782  NNVFVPISQVVSDFTTEWEDPLIMRRDRKRVISVLADPLNGGNETADSVFRKLRPKVEAI 841

Query: 831  NAKLPPGYRVVIGGAVEESQKSQAPILAVMPLMLFIMATILMIQLQSFQRLVLVFAVAPL 890
            +  LP GY +  GG  E S ++Q  + + +PL    M  I ++   S ++ ++++   PL
Sbjct: 842  S--LPAGYELEWGGEYETSSEAQQSVFSSIPLGYLAMFLITVLLFNSVRQPLVIWFTVPL 899

Query: 891  ALIGVVAALVPSGAPLGFVAILGVLALIGILIRNSVILIVQIEQLRAEGRPPWDAVREAT 950
            ALIGVV+ L+   AP  F+A+LG+L+L G++I+N ++L+ QI    ++G+  + AV +++
Sbjct: 900  ALIGVVSGLLLFDAPFSFMALLGLLSLTGMIIKNGIVLVDQINLELSQGKDAYRAVFDSS 959

Query: 951  EHRMRPIMLTAAAASLGLIPIAREVFWGPMAYAMMGGIIVGTVLTLLFLPALYVAWFRIP 1010
              R+RP+++ A    LG+IP+  + F+G MA  ++ G+   +VLTL+ LP  Y   F I 
Sbjct: 960  VSRVRPVLMAAITTMLGMIPLLPDAFFGSMAITIIFGLGFASVLTLVVLPVAYTLVFGIK 1019

Query: 1011 APK 1013
             PK
Sbjct: 1020 VPK 1022