Pairwise Alignments

Query, 358 a.a., Multidrug resistance protein MdtE from Xanthobacter sp. DMC5

Subject, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 30/362 (8%)

Query: 2   RHARLMLLLASAAALAGCSE--QAAAPAVPPRPVLTAVVQPMSRDVLEVAGTIEPQVQTD 59
           + + L  ++ASA  LAGC E  Q +APA   +P LT +V       L   G +    + D
Sbjct: 12  KRSLLSAVIASALLLAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRAD 71

Query: 60  LSFRVLGRLLARSVNVGDVVTKDQVVAAIDDTALKLAVRSALAEVANAQAQLTNASGTED 119
           L+FR+ GRL   +V  GD V K Q++A++D    K A+ +A  E+ N + +   A    +
Sbjct: 72  LAFRISGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFE 131

Query: 120 RQRTLLETAATSRATFETAEQGRAAAEASLARAQANLVKAREQLGYAQLKAEFAGVVTAV 179
           +      T A S+     AE  +      LA+ +    +A+ +L Y Q+ A F GV++  
Sbjct: 132 K------TQAISK-----AELDKVTNRYDLAKNRVE--EAKRKLEYTQITAPFDGVISEK 178

Query: 180 GAELGQVVSPGRSVVTIARPDVREAVVDIGED-FIGDIRIGSPFQLSLQLDGAPVATG-- 236
             E    V   + ++ +   +  E  ++I     +  +R     +   +L   P      
Sbjct: 179 TIENFAQVQANQVIMILQDLNDLEVAIEIPHRVMLSGVR---NTRAIAELSAIPNQQFDL 235

Query: 237 RVREIAPQADSVTRTRRVRITLDNPPEAFRL--GATVAARPAGNLASD----LFIPGSA- 289
           ++R  + Q  S ++T  V +  ++  + FR+  G +    P  +  +D    + +P +A 
Sbjct: 236 KLRTYSTQPSSDSQTYSVVLGFED-LKGFRVMPGMSAKVIPVADKPADENTLITLPLTAL 294

Query: 290 VFTRDGKSFVWRVTAEDRTVHAQEITASAASGDKARVTAGLEAGTRLVTAGVHSLSEGQK 349
           V    GK FVW V A+++    + +       D+  +T  L+ G +++ AGV S+ EG  
Sbjct: 295 VPDNQGKQFVWVVNAQNQ-AEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMT 353

Query: 350 VR 351
           VR
Sbjct: 354 VR 355