Pairwise Alignments

Query, 514 a.a., Signal recognition particle protein from Xanthobacter sp. DMC5

Subject, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

 Score =  433 bits (1113), Expect = e-126
 Identities = 230/454 (50%), Positives = 312/454 (68%), Gaps = 3/454 (0%)

Query: 1   MFDTLSDRLGGILDKLKRRGALTEADVGEAMREVRRALIEADVALDVVRSFTDRVRQRAV 60
           MF+ L+DRL   L  +  +G LTE ++ + +REVR AL+EADVAL VVR F +RV++ AV
Sbjct: 1   MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV 60

Query: 61  GVEVIKSVTPGQMVVKIVHDELVATLGSDADPIDLNAPAPVPILMVGLQGSGKTTSTAKI 120
           GVEV KS+TPGQ  +KIV  +L A +G   + ++L A  P  ILM GLQG+GKTTS  K+
Sbjct: 61  GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL 120

Query: 121 AKRLTERGKRKVLMASLDTRRPAAMEQLATLGKQVEVATLPIVAGQSAVQIAKRAIEAAK 180
           +K L ER K+KVL+ S D  RPAA++QL TL   + V   P    Q  + IA  AI+ AK
Sbjct: 121 SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHAK 180

Query: 181 LGGYDVVMLDTAGRVTLDEGLMAEVAEVKAVTGPHEVLLVADSLTGQDAVNTAKAFDGRV 240
              YDV+++DTAGR+ +DE +MAE+  +     P E L V D++TGQDA +TAKAF   +
Sbjct: 181 KKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADTAKAFGDAL 240

Query: 241 GLTGIVLTRADGDGRGGAALSMRAVTGKPIKLLGTGEKMDALEDFDPHRVAGRILGMGDV 300
            LTG++LT+ DGD RGGAALS+R +TGKPIK +G GEK DALE F P R+A RILGMGDV
Sbjct: 241 PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV 300

Query: 301 VALVERAAENIDIEKAKITAERMR-KGTFDLDDLRGQLEQMAKMGGLGGLMGLMPGVAKV 359
           ++L+E    N+D EKA+  A++ + K  FDL+D R QL QM  MGG+ G++  +PG++++
Sbjct: 301 LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL 360

Query: 360 KNQIASANLDDKVFKRQVAIINSMTPKERRAPKLLDASRKRRIAAGSGTKVEEINRLLKM 419
              +    +DD+VFK+  AIINSMT KER+ P L+  SRK+RIAAGSGT+V+++NRLLK 
Sbjct: 361 PADMKD-KVDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNRLLKQ 419

Query: 420 HRQMADVMKSLGGAAGKRGPLAGLAGMMGFGGGG 453
             QM  +MK +    G +G +  + G+MG GG G
Sbjct: 420 FTQMQKMMKKM-QQGGMKGMMRNMQGLMGGGGRG 452