Pairwise Alignments

Query, 514 a.a., Signal recognition particle protein from Xanthobacter sp. DMC5

Subject, 457 a.a., signal recognition particle protein Ffh (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  429 bits (1103), Expect = e-124
 Identities = 228/451 (50%), Positives = 303/451 (67%), Gaps = 1/451 (0%)

Query: 1   MFDTLSDRLGGILDKLKRRGALTEADVGEAMREVRRALIEADVALDVVRSFTDRVRQRAV 60
           MF+ L+DRL   L  +  RG LTE +V E +REVR AL+EADVAL VVR F + V++RAV
Sbjct: 1   MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV 60

Query: 61  GVEVIKSVTPGQMVVKIVHDELVATLGSDADPIDLNAPAPVPILMVGLQGSGKTTSTAKI 120
           G EV KS++PGQ  +KIV  EL  ++G     +DL    P  ++M GLQG+GKTTS AK+
Sbjct: 61  GQEVAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKL 120

Query: 121 AKRLTERGKRKVLMASLDTRRPAAMEQLATLGKQVEVATLPIVAGQSAVQIAKRAIEAAK 180
            K L  R K+ VL+ S D  RPAA++QL TL  +V+V   P    Q  + IAK AI  AK
Sbjct: 121 GKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIAHAK 180

Query: 181 LGGYDVVMLDTAGRVTLDEGLMAEVAEVKAVTGPHEVLLVADSLTGQDAVNTAKAFDGRV 240
           L   DVV+LDTAGR+ +DE +M E+  + A   P E L V D++TGQDA NTAKAF+  +
Sbjct: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANTAKAFNEAL 240

Query: 241 GLTGIVLTRADGDGRGGAALSMRAVTGKPIKLLGTGEKMDALEDFDPHRVAGRILGMGDV 300
            LTG++LT+ DGD RGGAALS+R +TGKPIK LG GEK DALE F P R+A RILGMGDV
Sbjct: 241 PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV 300

Query: 301 VALVERAAENIDIEKAKITAERMRK-GTFDLDDLRGQLEQMAKMGGLGGLMGLMPGVAKV 359
           ++L+E     +D EKA   A ++++ G+FDL+D R QL+QM  MGG+  ++  +PGV ++
Sbjct: 301 LSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMSMIEKLPGVGQL 360

Query: 360 KNQIASANLDDKVFKRQVAIINSMTPKERRAPKLLDASRKRRIAAGSGTKVEEINRLLKM 419
                +   D K+ ++  AIINSMT KER+ P L+  SRKRRIAAGSGT+++++NRLLK 
Sbjct: 361 PPDALAQIQDGKMTRQMEAIINSMTAKERKNPDLIKGSRKRRIAAGSGTEIQDVNRLLKQ 420

Query: 420 HRQMADVMKSLGGAAGKRGPLAGLAGMMGFG 450
             QM  +MK +    G +  + G+ GMM  G
Sbjct: 421 FTQMQKMMKKMSAKGGMQKMMRGMRGMMPGG 451