Pairwise Alignments

Query, 324 a.a., Ribose import permease protein RbsC from Xanthobacter sp. DMC5

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  215 bits (547), Expect = 1e-60
 Identities = 122/295 (41%), Positives = 176/295 (59%), Gaps = 4/295 (1%)

Query: 27  LLAAGLLCVALSVATDAFFTTNNILNVLRQASLLFFLASGLTLVILTGGLDLSVGANIGL 86
           L+A   L V +S     FFT +N+LN+LRQ S+   +A G+TLVILT G+DLSVG+ + L
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLAL 94

Query: 87  SACLAATVIKATGSPALGTLTGLATGCAIGVCNGLMVAKLRIPSFIATYGMLWVLHGLTY 146
               AAT++       +   T L  G A+G  +G+++AK ++ +FIAT   + +L G+T 
Sbjct: 95  CGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTM 154

Query: 147 YYMAGETIH-GFPPG---FRQIGSGYFLGIPIPVYLMIGFLIAGSVFAQRTVWGQQIYAI 202
            Y  G  I  GF      F   G+GY LGIP+PV+LM+            T +G+ +YA+
Sbjct: 155 VYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAV 214

Query: 203 GANPVAARLTGIPVDRRLILVYAFSGAMAGVASIVFLARLNSAEGDIGEAMTLPAIAAVL 262
           G N  A RL+GI VDR  I VYA  G +A +A I+  +RL+SA+   G    L AIAAV+
Sbjct: 215 GGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVV 274

Query: 263 IGGASLFGGVGSVFGTFVGALILTLVLNGMNLLAVNSSWQPLVTGVIVIFAVWLD 317
           +GG SL GG G + GT +GALI+  + N +NLL V+S +Q +   V+++ AV +D
Sbjct: 275 LGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVD 329