Pairwise Alignments

Query, 324 a.a., Ribose import permease protein RbsC from Xanthobacter sp. DMC5

Subject, 341 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  183 bits (465), Expect = 5e-51
 Identities = 109/303 (35%), Positives = 179/303 (59%), Gaps = 20/303 (6%)

Query: 37  LSVATDAFFTTNNILNVLRQASLLFFLASGLTLVILTGGLDLSVGANIGLSACLAATVIK 96
           L V       +  +  ++ Q S++  +A G+T VI+TGG+DLS G+ +G++A ++A+V +
Sbjct: 44  LFVGQSFLMNSQRLTIMILQVSVIGIIAVGVTQVIITGGIDLSSGSVVGMTAMISASVAQ 103

Query: 97  A-----------TGSPALGTL-TGLATGCAIGVCNGLMVAKLRIPSFIATYGMLWVLHGL 144
           A           T  PA+  +  G+  G   G  NG ++A+ +IP FIAT GM+    G+
Sbjct: 104 ASTWPRALYPSLTDLPAIVPIGLGVGIGLLAGFINGQLIARTKIPPFIATLGMMVSARGV 163

Query: 145 TYYYMAGETIHGFPPGFRQIGSGYFLGIPIPVYLMIGFLIAGSVFAQRTVWGQQIYAIGA 204
           + +Y  G+ + G    F  IG+G +   P+ V+L++  +    +  + T +G+  YAIGA
Sbjct: 164 SKWYTKGQPVSGLTEQFNFIGTGIW---PVIVFLVVALIF--HIALRYTRYGKFTYAIGA 218

Query: 205 NPVAARLTGIPVDRRLILVYAFSGAMAGVASIVFLARLNSAEGDIGEAMTLPAIAAVLIG 264
           N  AAR++GI V+  L+ VYA +G +AG+A +V  AR  +A+  +G    L AIAA +IG
Sbjct: 219 NVQAARVSGINVEAHLVKVYAIAGMLAGLAGVVTAARAQTAQAGMGVMYELDAIAATVIG 278

Query: 265 GASLFGGVGSVFGTFVGALILTLVLNGMNLLAVNSSWQPLVTGVIVIFAVWLDMI---GR 321
           G SL GGVG V GT +G +IL ++ +G   L V++ +Q +V G+I++ AV +D+    GR
Sbjct: 279 GTSLTGGVGRVTGTVIGTVILGVMTSGFTFLRVDAYYQEIVKGIIIVAAVVVDVYRQKGR 338

Query: 322 KRS 324
           K++
Sbjct: 339 KKT 341