Pairwise Alignments

Query, 332 a.a., Ribose import binding protein RbsB from Xanthobacter sp. DMC5

Subject, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (409), Expect = 1e-44
 Identities = 91/293 (31%), Positives = 165/293 (56%), Gaps = 6/293 (2%)

Query: 8   LKLIAAALPVALLSTGA---LAADETIAVFTKNQTNPYFQTVRVGAEAAAKSMGAKVVHY 64
           +K +   +  ALLST       A +T+A+      NP+F T++ GAEA AK +G  ++  
Sbjct: 3   MKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLI-- 60

Query: 65  IPTKPDSIPEQLSQIEDVIVKKPSAIVFVPVDYKAMVPGVEQINDAKIPVVNVTDRSAGG 124
           +    +   ++LS +ED+ V+   AI+  P D  A+   +   N +KIPV+ +   ++ G
Sbjct: 61  VLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRG 120

Query: 125 KFLAFVGADDYSLGLETGRYLLKEMGGKGNVVILEGVKGSLTNIDRVRGFTDAIKENKDV 184
           + ++ + +D+   G   G ++  ++G    V+ LEG+ G+    +R  GF +A+K +K +
Sbjct: 121 EVVSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVKGSK-M 179

Query: 185 KLLASQPANYQRLQGLQVMENLMQSHPQIDGVLAANDAMAIGAIEALDGANRKAKVIGIN 244
           +LLASQPA++ R +GL VMENL+ ++P +  V A ND MA+GA+ A+  + +   ++G +
Sbjct: 180 QLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGKSVMIVGFD 239

Query: 245 GTKEAIDAIKAGKLLASGDYNGFVQGCIGTMVAIRSLRNEAIVSEVVLKPTVV 297
           GT + I A++ G+L A+      + G IG   A + L+ E + + + +   V+
Sbjct: 240 GTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVI 292