Pairwise Alignments

Query, 332 a.a., Ribose import binding protein RbsB from Xanthobacter sp. DMC5

Subject, 309 a.a., rhizopine uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  105 bits (263), Expect = 1e-27
 Identities = 88/306 (28%), Positives = 140/306 (45%), Gaps = 12/306 (3%)

Query: 9   KLIAAALPVALLSTGALAADETIAVFTKNQTNPYFQTVRVGAEAAAKSMGAKVVHYIPTK 68
           K         L+ST A A  ETI V      + +   +R G +  AK++   V   +   
Sbjct: 3   KFFLGTAMAVLMSTAAHA--ETIGVSMALFDDNFLTVLRSGMQEYAKTLDG-VELQVEDA 59

Query: 69  PDSIPEQLSQIEDVIVKKPSAIVFVPVDYKAMVPGVEQINDAKIPVVNVTDRSAGGKFL- 127
            + + +Q SQI++ I     AI+  PVD  A     +   DA IP+V V         L 
Sbjct: 60  QNDVAKQQSQIQNFIAAGVDAIIVNPVDTDATAAMSKIAADAGIPLVYVNREPVNVDTLP 119

Query: 128 ---AFVGADDYSLGLETGRYLLKEMGGKGNVVILEGVKGSLTNIDRVRGFTDAIK--ENK 182
              AFV +++   G    + + K +GGKG  V++ G   +     R +   D I   E K
Sbjct: 120 DKQAFVASNEQESGTLQTKEICKMLGGKGKAVVMMGELSNQAARMRTKDIHDVIATDECK 179

Query: 183 DVKLLASQPANYQRLQGLQVMENLMQSHPQIDGVLAANDAMAIGAIEALDGANRKAKVI- 241
            ++++  Q AN+ R QG  +M N + +  + D V++ ND MAIGAI+AL  A R    + 
Sbjct: 180 GIEIVEEQTANWSRTQGSDLMTNWLSAGLEFDAVISNNDEMAIGAIQALKAAGRSMDSVV 239

Query: 242 --GINGTKEAIDAIKAGKLLASGDYNGFVQGCIGTMVAIRSLRNEAIVSEVVLKPTVVNA 299
             GI+ T++A+ A+ AG L  +   N   QG      A++  + E +  +V +   +V  
Sbjct: 240 IGGIDATQDALAAMAAGDLDVTVFQNAAGQGKGSVDAALKLAKGEPVEKKVYIPFELVTK 299

Query: 300 SNYQPY 305
            N   Y
Sbjct: 300 DNLAQY 305