Pairwise Alignments

Query, 332 a.a., Ribose import binding protein RbsB from Xanthobacter sp. DMC5

Subject, 334 a.a., Periplasmic binding protein/LacI transcriptional regulator (NCBI) from Rhodospirillum rubrum S1H

 Score =  122 bits (307), Expect = 1e-32
 Identities = 99/286 (34%), Positives = 147/286 (51%), Gaps = 14/286 (4%)

Query: 8   LKLIAAALPVALLSTGALAADET---IAVFTKNQTNPYFQTV-RVGAEAAAKSMGAKVVH 63
           L L A A    L ++ A+AAD     IAV        + Q + R G E  A   G   V 
Sbjct: 4   LLLTACAAAALLSASAAMAADAPKARIAVLMYGNKAEFVQLMERYGKEHPAVKAGIAEVT 63

Query: 64  YIPTKPDSIPEQLSQIEDVIVKKPSAIVFVPVDYKAMVPGVEQINDAKIPVVNVTDRSAG 123
           +   + D+  +   Q +  I  K  AIV  P+DY+A +        A IPVV    R   
Sbjct: 64  FYDGRYDAAVQN-DQAQMAINTKQDAIVVNPMDYEANIDIATNAKMAGIPVVVTNARLNT 122

Query: 124 GKFLAFVGADDYSLGLETGRYLLKEMGGKGNVVILEGVKGSLTNIDRVRGFTDAIKE--N 181
            +  A V +DD   G    + +L ++G KGNVVI+EG KG    I R +G   A+ E   
Sbjct: 123 DEMTAEVVSDDVLGGYLEAKDVLTKLGCKGNVVIIEGPKGGSGEIQRGQGNEKALAECPA 182

Query: 182 KDVKLLASQPANYQRLQGLQVMENLMQSHP-QIDGVLAANDAMAIGAIEALDGANRKAK- 239
             VK+L  + AN+ R + L +M+N +  HP +I+GV+  ND MA+GAIEA+  A+   K 
Sbjct: 183 GAVKVLERKTANWSRAEALDLMQNWLSKHPGKINGVIGQNDEMALGAIEAIKAADLNVKD 242

Query: 240 --VIGINGTKEAIDAIKAGKLLA-SGDYNGFVQGCIGTMVAIRSLR 282
             + GI+G  +A+ A+KAG++ +   D  G +QG I   VA+R+++
Sbjct: 243 FAIAGIDGVTDALHAVKAGEMTSILQDARGQIQGSID--VALRAVK 286