Pairwise Alignments

Query, 602 a.a., putative ABC transporter ATP-binding/permease protein from Xanthobacter sp. DMC5

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  185 bits (469), Expect = 5e-51
 Identities = 123/473 (26%), Positives = 228/473 (48%), Gaps = 3/473 (0%)

Query: 91  VAELRPWFFARLIPLAPAALEDQRSGDLLARLKGDIDRLEFAFLRILSPGLAAVLVLAVG 150
           V ++R   F   + +     + + +G LL+R+  D +++  A  R L   +     +   
Sbjct: 97  VMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGL 156

Query: 151 LTVLALHDGGMAVGIGLAALLAGLGLPLLVHRLGARVAREVTAGTAQLNALLVDHLEGRA 210
           LT++  +   +++ + + A +    +  +  R   +++R +      + +     L+G  
Sbjct: 157 LTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRF-RKISRNMQTAMGHVTSSAEQMLKGHK 215

Query: 211 ELDIYDPDRRHRAALDETSDTLIAREHRLAGILGFAGAGVGLFAQSSLVLVLLIGAPRVL 270
            +  Y      R   D+ S+++  +  +L      A   + + A  +L  VL + +   +
Sbjct: 216 VVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSI 275

Query: 271 AGTLPGADLPMLALLALSLFEAVAPLPLAFQTLPATLASARRIFDLLDRPPPVEEPAAPK 330
              L      ++      L   +  L          +A+ + +F L+D      +    +
Sbjct: 276 RAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETE-RDNGKYE 334

Query: 331 PVPETGTLAFAHAGLTYPGASGPALTDIDLALAPGRRIGVVGSSGSGKSSLVALALRFRA 390
                G +       TY G   PAL+ +  ++  G+ + +VG SGSGKS++  L  RF  
Sbjct: 335 AERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYD 394

Query: 391 PAPGEVTFAGSSIADFNSDDLRRRMAVLAQHDHLFAATIRENLL-VADPDASPEKLEAAL 449
              G +   G  + D+   +LRR  A+++Q+ HLF  TI  N+   A+ + + E++E A 
Sbjct: 395 VDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAA 454

Query: 450 ERAGVLAFVAAQPEGLDTFLGANGAKVSGGQARRLGLARALLKEAPLLILDEPTEGLDGE 509
            +A  + F+   P+GLDT +G NG  +SGGQ +R+ +ARALL++AP+LILDE T  LD E
Sbjct: 455 RQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTE 514

Query: 510 TERDVLEGVLGVARDQALLFITHRRAGLEAMDEIIVMDGGRIVARGAPADMLA 562
           +ER +   +  + +++ +L I HR + +E  DEI+V+D G I+ RG  AD+LA
Sbjct: 515 SERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLA 567