Pairwise Alignments

Query, 266 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 255 a.a., ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 1 LivG (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  229 bits (583), Expect = 6e-65
 Identities = 119/250 (47%), Positives = 164/250 (65%), Gaps = 1/250 (0%)

Query: 7   LLDVSGIGISFGGLKAVDAVSFKVGAGEVFSIIGPNGAGKTTLFNLVTGIYRPSRGSVRL 66
           +L V  + + FGGL AV+ V+  V   +V ++IGPNGAGKTT+FN +TG Y+P+ G++ L
Sbjct: 5   ILKVENLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYQPTGGTILL 64

Query: 67  DGADITTVPPHRRVSRGMARTFQNLQIFFRMTAVENVMVGCALSERTSFLADMLGLPSVF 126
           DG  I  +P H    +G+ RTFQN+++F  MTAVEN+++       T+F A +   P+  
Sbjct: 65  DGEPIQGLPGHHIARKGVVRTFQNVRLFKDMTAVENLLIAQHRHLNTNFFAGLFKTPAFR 124

Query: 127 RQNRVTREKALALLDRVGLAALADAPAGALPYGALKRLEIARALAADPKILLLDEPAAGC 186
           +  R   E A   LD+V L   A+ PAG L YG  +RLEIAR +   P+IL+LDEPAAG 
Sbjct: 125 KSEREAMEYAEYWLDKVNLTEFANRPAGTLAYGQQRRLEIARCMMTRPRILMLDEPAAGL 184

Query: 187 NAVETEAIDHLIAEI-AKGGIAVVLIEHDMKLVMKISDRVLVLAQGRPLAEGPPRAVREN 245
           N  ETE +  LI  +  +  + V+LIEHDMKLVM ISD ++V+ QG PLA+G P  +R+N
Sbjct: 185 NPKETEDLKALIGVLREEHNVTVLLIEHDMKLVMSISDHIVVINQGTPLADGTPEQIRDN 244

Query: 246 PEVIAAYLGD 255
           PEVI AYLG+
Sbjct: 245 PEVIKAYLGE 254