Pairwise Alignments

Query, 266 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 260 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  196 bits (497), Expect = 5e-55
 Identities = 108/249 (43%), Positives = 155/249 (62%), Gaps = 1/249 (0%)

Query: 7   LLDVSGIGISFGGLKAVDAVSFKVGAGEVFSIIGPNGAGKTTLFNLVTGIYRPSRGSVRL 66
           LL+ +G+  +F GLKA+   + +V  GE+  +IGPNG+GK+TLFN++TG   PS G V L
Sbjct: 10  LLETAGLCKNFRGLKALRDHALRVAPGEILGVIGPNGSGKSTLFNVITGFSPPSAGRVCL 69

Query: 67  DGADITTVPPHRRVSRGMARTFQNLQIFFRMTAVENVMVGCALSERTSFLADMLGLPSVF 126
           +G ++T   P   V +G+ARTFQ  ++F  +TA EN+     L+ R    + +L  P   
Sbjct: 70  NGIEVTGWRPDAIVRQGIARTFQGSRLFKALTAAENIEAAAQLALRPGLFSTLLRPPGYR 129

Query: 127 RQNRVTREKALALLDRVGLAALADAPAGALPYGALKRLEIARALAADPKILLLDEPAAGC 186
           R+          +LD VGL    D  AG LPYGA +RLEIARA+A  PK+L+LDEPAAG 
Sbjct: 130 RRTDEIVAIGQQMLDLVGLGKWGDRRAGDLPYGAQRRLEIARAMATKPKLLMLDEPAAGL 189

Query: 187 NAVETEAIDHLIAEIAK-GGIAVVLIEHDMKLVMKISDRVLVLAQGRPLAEGPPRAVREN 245
           N  ET  +  LI ++ +  G+AV+++EHDM L+  + +R+ VLAQG  + EG   A+++N
Sbjct: 190 NTHETAELMTLIRQLRELYGVAVIIVEHDMDLIGTLCERIQVLAQGTVIGEGSFAAIQDN 249

Query: 246 PEVIAAYLG 254
             V  AYLG
Sbjct: 250 IRVREAYLG 258