Pairwise Alignments

Query, 177 a.a., 50S ribosomal protein L6 from Xanthobacter sp. DMC5

Subject, 182 a.a., 50S ribosomal protein L6 from Methanococcus maripaludis S2

 Score = 55.8 bits (133), Expect = 4e-13
 Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)

Query: 9   VAIPAGVTASLDGQTVKVK-GPKGALEVILVEEIAAKIEGSEIQLSMNGETSRHKAMWGM 67
           + IP  V   ++G TV VK G K     ++   I    E  ++ +          A+ G 
Sbjct: 11  IEIPENVNVEINGSTVVVKSGAKELKRELMYPGIEISTEDGKVVIECAFPRKAQTAIVGT 70

Query: 68  SRTLVSNLVEGVTKGFEKKLEITGVGYKAAVQGKN----LNLSLGYSHDVIYAIPEGIQI 123
            R+ + N++ GVT GFE KL I    +   V  K     ++  LG  +     I +G+  
Sbjct: 71  YRSHIQNMITGVTDGFEYKLVIRYAHFPMKVSAKGNTVMIDNFLGEKYTRTAKIMDGV-T 129

Query: 124 VTPKPTEVVVTGIDRQKVGQVAAEIREFRGPEPYKGKGVK--YAGEFIFRKEGK 175
           V     +VVV+G +++ VGQ AA I +       KG+  +    G +I  K GK
Sbjct: 130 VKVSGEDVVVSGANKEFVGQTAANIEQ---ATKVKGRDTRIFQDGIYIVEKAGK 180