Pairwise Alignments

Query, 485 a.a., Periplasmic pH-dependent serine endoprotease DegQ from Xanthobacter sp. DMC5

Subject, 491 a.a., Peptidase S1C, Do (NCBI) from Rhodospirillum rubrum S1H

 Score =  441 bits (1133), Expect = e-128
 Identities = 250/488 (51%), Positives = 318/488 (65%), Gaps = 23/488 (4%)

Query: 7   GLAAAAAFALLLGTPAFAQPAAQQ--------RVPASQAEVTLTFAPVVAKTAPAVVNVY 58
           G+ A A+ A+LL     A  AA+Q        +VP + AE+ LTFAPVV   APAVVN++
Sbjct: 18  GVLAGASVAVLLAFGGPAAGAAEQVPGAGTAEQVPMAAAEIKLTFAPVVRAVAPAVVNIF 77

Query: 59  ALKT-AQQRVNPIFDDPFFRRFFGMPGPGGPGGPGDGPGLRAPERVQRSLGSGVIVDPSG 117
           + +   + +V P+F DP FRRF    G  G          +  ERVQRSLGSGVI+   G
Sbjct: 78  SQRVITESQVPPMFADPLFRRFLEERGMLG----------KPRERVQRSLGSGVILRSEG 127

Query: 118 LVLTNYHVIEGADEIRIALNDRREYEAEVLLRDQRTDLAVLRIKTEAKERFPFLELGDSD 177
           +V+TN HV+ GA EI +ALNDRRE+ AE++  D R DLAVLRIK++     P L L D +
Sbjct: 128 VVVTNAHVVNGASEITVALNDRREFPAELVGLDPRADLAVLRIKSDTP--LPSLALADGE 185

Query: 178 SLAVGDLVLAIGDPFGVGQTVTQGIVSALARTQVGVSDYQFFIQTDAAINPGNSGGPLVD 237
              VGDLVLAIG+PFGVGQTVT GIVSA ART  G+SDY+FFIQTDAAINPGNSGG LVD
Sbjct: 186 PPEVGDLVLAIGNPFGVGQTVTSGIVSAQARTTAGISDYRFFIQTDAAINPGNSGGALVD 245

Query: 238 MAGRVVGINSAIYSRSGGSHGIGFAIPANMGRVVVEQAKSGSKSVRRPWLGAKLQRVTPD 297
           ++GR+VGIN+AIYSR GGS GIGFAIP  M R VVE      K VR PWLGA  Q VT +
Sbjct: 246 LSGRLVGINTAIYSRDGGSVGIGFAIPVEMVRSVVEGILEDGK-VRHPWLGADGQSVTTE 304

Query: 298 IAESLGLPRPTGVLVQSVTAGSPAAKAGLRTGDLVVSVEGQGIDDPESLNYRLATRPIGG 357
           +A  +GL RP GV +  V  G PAAKAGL  GD++++++G+ + + E+L YR+AT   G 
Sbjct: 305 LASHMGLDRPLGVAITDVAKGGPAAKAGLAEGDVILALDGRPVFEGETLRYRIATHRPGD 364

Query: 358 RAALLVNRSGKDQTLVVVLEVAPETVPREELLLRGRSPFAGATIVNLSPAVAEELKVDTN 417
           +  L + R GKD TL V LE  PE  PR+  LL+G  PF GA + N++PA+AEEL ++  
Sbjct: 365 KVVLGIRRDGKDTTLAVTLEAPPEDPPRDTTLLKGSHPFDGAEVSNMNPALAEELGLEKA 424

Query: 418 ATGVVVYDVQDNSPAAAAGFRPGDVIVEVNNEKVARTGDLNQLAAVPQRGWRVTVLRGGR 477
           + GV V  + D   AA  G RPGD ++EVN + +    DL    + P R W+V V R GR
Sbjct: 425 SRGVTVTGLGD-GVAARIGIRPGDRVIEVNGKAIDAVRDLKAAISKPSRVWQVVVDRDGR 483

Query: 478 SITAVLRG 485
           ++  VL G
Sbjct: 484 AVRLVLGG 491