Pairwise Alignments

Query, 224 a.a., Transcriptional regulatory protein DegU from Xanthobacter sp. DMC5

Subject, 219 a.a., two component LuxR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  201 bits (510), Expect = 1e-56
 Identities = 105/208 (50%), Positives = 147/208 (70%), Gaps = 1/208 (0%)

Query: 9   LRLVIADDHPLFRGALREAVLGRSADARIEEVGTFDDLTALLERDQD-FDLILLDLTMPG 67
           L ++IADDHPLFR ALR+A+ G  AD +  E  + + L  LLE+    +DL+LLDL MPG
Sbjct: 6   LHIIIADDHPLFRNALRQALSGAFADTQWFEADSAEALQGLLEQGNTAYDLVLLDLQMPG 65

Query: 68  ARGFSGLIYLRAQYMAIPVVVVSGNEEPAVIRRCLDLGASGFIPKSMSVGNMRDAVAQVL 127
           + G+S LI+LR  +  +PVVV+S +E+   I R +  G++GFIPKS S+  + +A+  VL
Sbjct: 66  SHGYSTLIHLRTHFPELPVVVISAHEDAMTISRAVHYGSAGFIPKSASMETLSEALTAVL 125

Query: 128 KGETFLPPDINVTTKADAETDAIIARLSTLTPQQVRVLMMLAEGRLNKQIAYELSVSEAT 187
            G+ +LP +I +    +  TD + A+L+ LTPQQ +VL M AEG LNKQIAY+L VSEAT
Sbjct: 126 YGDIWLPDNIELQEINEDATDQMAAKLADLTPQQYKVLQMFAEGLLNKQIAYDLGVSEAT 185

Query: 188 VKAHVSAILQKLGVESRTQAVIAVSKVE 215
           +KAH +AI +KLGV +RTQAVIA+ ++E
Sbjct: 186 IKAHATAIFRKLGVRNRTQAVIALQQLE 213