Pairwise Alignments

Query, 341 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 342 a.a., DNA polymerase III, delta subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  201 bits (510), Expect = 3e-56
 Identities = 120/329 (36%), Positives = 182/329 (55%), Gaps = 1/329 (0%)

Query: 10  DAALARRDRTKSVILIYGPDTGLVRERAEGLVRRAVPDAHDPFALVRLEGDEIASDPRRL 69
           D  L + D     +L+YGPD GLVRER E L R  V D  DPF +  L GD++ +DP RL
Sbjct: 9   DGFLRKPDPKIRCVLVYGPDEGLVRERLEQLARTVVADPKDPFRITDLSGDDLRADPARL 68

Query: 70  IDETSTIGLFGGERVVWVRAGSKNIVPAIQPVLSNPC-DALVVVEAGDLKKGAPLRTLCE 128
            DE + +   GG R+V +R  +    P ++  +  P  +ALV+V+ GDL   + LR L E
Sbjct: 69  ADEAAALAFGGGRRLVRLRQMTDQHAPRLKAFVEAPVGEALVLVQGGDLTARSALRKLFE 128

Query: 129 NAQNALAIACYADSERDLARLVDAMMAEAGLSIDRDARELLVSLIGGDRLASRGEIAKLI 188
            A  A A+ CYAD  R L  LV A +AEA L+   +  + LV+ +GGDR  SR E+AKL+
Sbjct: 129 GASAAAALPCYADEGRSLETLVRATLAEARLAAAPEVIDYLVANLGGDRGVSRSELAKLV 188

Query: 189 LYAMGTERVTLEDVRLIVGDASALALDDVVDSALAGETRDALAALSKAFGAATRPDAVLG 248
            Y      V+L+D    VGD++ + LD + ++   G++  AL AL +         A+L 
Sbjct: 189 TYCGKATSVSLDDALACVGDSAQIGLDMLTNAVAEGDSATALRALDRLGQEGMATVALLR 248

Query: 249 GLLRALTALHPMTLAVAGGSSPETVVGSARPPVHFSRKPKLEKALRGLDPDRCMKALLAV 308
           GL R  T LH +   +AGG+S +  + + +PPV F   P+    ++    +R  +AL  +
Sbjct: 249 GLTRHFTRLHLVAGLIAGGTSVDQALAALKPPVMFKLAPRFRSQVQRWSAERLAQALDLL 308

Query: 309 DDAVLAARRNTPLAPAICERVVLQVAQQA 337
            DA + A+ +     A+ ER++L++A+ A
Sbjct: 309 LDAEIDAKSSGLPERALVERLLLRLARGA 337