Pairwise Alignments

Query, 335 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 356 a.a., branched-chain amino acid transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  172 bits (436), Expect = 1e-47
 Identities = 113/326 (34%), Positives = 166/326 (50%), Gaps = 36/326 (11%)

Query: 36  LAVLPFVLPSQAL---AVNVLIYGLFTVGFNLLFGYTGLLSFGHAAFFGTGAYLTGMAIA 92
           LA  PF+ P       A  + I+ +    ++LL GY G++SF H  FFG GAY   +   
Sbjct: 27  LAFAPFLFPGVRTVDTAARICIFIVLVASYDLLLGYGGIVSFAHTMFFGMGAYGVALTST 86

Query: 93  HLGFGWFPAMLTGIVGASL---LSAVIGALSIRTRGIYFCMVTLALAQLVYYVALQASGW 149
           H+G G+    +  I GA+L   L+ +IG  S+R R I+F M+TLA+A  V  +  Q SG 
Sbjct: 87  HMGRGFDALAIGAISGAALAAVLALLIGLFSLRVRAIFFAMITLAVASAVAVLVSQLSGL 146

Query: 150 TGGENGLR---------GFTVAKADLIGG-FSVNLLNPLAKYYFIMFFAALALWFVSRVL 199
           TGGE+GL           F   K    G  F V L   L  YY I   +AL    + RV+
Sbjct: 147 TGGEDGLTFKTPRELGPAFKFGKETFDGTLFGVKLNGKLLTYYLIFGGSALLFLALLRVV 206

Query: 200 NSPFGAAIEAVRENETRARACGFDVERTKLLSFILSGALCGLAGTLSALHLSIV-PLDAL 258
           NSPFG  ++A+REN+ RA A G+ V   ++ +  LS A+  L+G+L A+ L  V P   L
Sbjct: 207 NSPFGRVLQAIRENDFRAEAIGYRVVYYRVTATCLSAAIAALSGSLYAIWLRYVGPDTTL 266

Query: 259 SVHTSSIVVMMTMLGGAGSFFGPFVGALVFLLIEDVAS-------------------LWT 299
           S+     +++M ++GG G+ +G  +GA +F+L ++                      L  
Sbjct: 267 SMTIMIDILLMVVIGGMGTIYGAVIGATLFVLAQNYLQNLMGVLSSMTEGLPLLPELLSP 326

Query: 300 THWQLIVGIVFILFVLFLPKGIWGSL 325
             W L +G++FIL V F P G+ G L
Sbjct: 327 DRWLLWLGVLFILSVYFFPSGVVGRL 352