Pairwise Alignments

Query, 677 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 789 a.a., YgiQ family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

 Score =  893 bits (2307), Expect = 0.0
 Identities = 436/682 (63%), Positives = 518/682 (75%), Gaps = 43/682 (6%)

Query: 24  APFLPMSRAEMAALGWDQCDIVLVTGDAYVDHPSFGMAIIGRLLEAQGFRVGIISQPDWQ 83
           APFLP SR EM  LGWD CD+++VTGDAYVDHPSFGMAIIGRLLEAQGFRVGII+QP+WQ
Sbjct: 22  APFLPTSREEMDQLGWDSCDVIIVTGDAYVDHPSFGMAIIGRLLEAQGFRVGIIAQPEWQ 81

Query: 84  SAEPFKALGKPRLFFGVTGGNLDSMVNRYTADRRLRHDDAYTAGGEGGRRPDRSTIVYTQ 143
           + + F  LGKP LFFGVT GN+DSM+NRYTAD+++RHDDAYT   +GG RPDR ++VY+Q
Sbjct: 82  TKDAFMTLGKPNLFFGVTAGNMDSMINRYTADKKIRHDDAYTPNNKGGMRPDRCSLVYSQ 141

Query: 144 RCREAYKDVPIILGGIEASLRRIAHYDYWSDKVRRSILADAKADLLIYGNAERAVVEVAN 203
           RCREAYKDVPI+LGGIEASLRR+AHYDYWSDKVRRSIL DAKAD+L++GNAERA+VEVA+
Sbjct: 142 RCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSILLDAKADILLFGNAERALVEVAH 201

Query: 204 RIADGEAPRDIDDVRGVAL-FRRVPEHYTELHADDLDA--------------------SD 242
           R+A+GE+   + D+RG A+   +VPEH+  + +  +D                      D
Sbjct: 202 RLANGESINKMVDIRGTAVNLAQVPEHFKIIDSTRIDQPNKPFVPSNPYEVETQCATKGD 261

Query: 243 EGAARRPGDV----------VIRLPAYEQVEVDKEAYARASRVLHRESNPGNARPLVQRH 292
           E    +P  +           +RLP++E++  D+  YA ASRVLH E+NP + R LVQRH
Sbjct: 262 EKEEAQPITIRPSRHDAKTTAVRLPSFEKLVNDRILYAHASRVLHLETNPYSGRALVQRH 321

Query: 293 GDRDLWLNPPPIPLTTQEMDAVYDLPYARAPHPSYGEAKIPAWDMIRFSVTIMRGCFGGC 352
           GDR+LW+N  PIPLTT+EMD V+ L YAR PHP YG+AKIPA+DMI+ SV IMRGCFGGC
Sbjct: 322 GDRELWVNQAPIPLTTEEMDFVFGLYYARVPHPKYGDAKIPAYDMIKTSVNIMRGCFGGC 381

Query: 353 TFCSITEHEGRIIQNRSEGSILREIELIRDKTPGFTGVISDIGGPTANMYRMACKDPKIE 412
           +FCSITEHEGRIIQNRS+ SI+ E++ IRDK PGFTGVISD+GGPTANMYR+ C DPK E
Sbjct: 382 SFCSITEHEGRIIQNRSQESIINELKEIRDKVPGFTGVISDLGGPTANMYRLGCSDPKAE 441

Query: 413 AACRRPSCVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYVKE 472
           A CRRPSCVFP IC  LNT H   I LYR  R+V+G+KKV++ASGVRYDLA++SPEYV+E
Sbjct: 442 ANCRRPSCVFPGICHKLNTDHKHTIDLYRAARDVDGIKKVVIASGVRYDLAIESPEYVRE 501

Query: 473 LVTHHVGGYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFDAAVKQAGKKYYLIPYFIAA 532
           LVTHHVGGYLKIAPEHTE+GPL  MMKPG+GTYDRFKE+F+    +AGKK YLIPYFIAA
Sbjct: 502 LVTHHVGGYLKIAPEHTEKGPLSMMMKPGMGTYDRFKELFEKYSAEAGKKQYLIPYFIAA 561

Query: 533 HPGTTDEDMMNLALWLKKNRYRADQVQTFLPSPMATATAMYHTGVNPLRAVRRGGSERVA 592
           HPGT DEDM+NLALWLK N YR DQVQ F PSPM  ATAMYH  VNPL+ V+    E+V 
Sbjct: 562 HPGTEDEDMVNLALWLKSNNYRCDQVQNFYPSPMCNATAMYHAEVNPLKRVKYKKPEKVP 621

Query: 593 TVTGLRQRRLHKAFLRYHDPDNWPLLREALKAMGRADLIGPRPDQLVPAHQ----PPGTG 648
              G  QRRLHKA LRYHDP NWP++REAL AMG+  LIG RP+ L+P        P   
Sbjct: 622 VAKGEAQRRLHKALLRYHDPANWPMIREALIAMGKRHLIGDRPECLIPEKDSDLVTPAQS 681

Query: 649 KAAGTRRPVRPAPAGAQRFTTK 670
           + +G          GA RF TK
Sbjct: 682 RKSGRH--------GANRFATK 695