Pairwise Alignments

Query, 253 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 251 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 13/245 (5%)

Query: 11  RGRGLVLFVLACAAFAVLIGLGTWQLNRLAWKEALLARVEARVHAAPED---VPPPARWP 67
           RG  + L ++    F +L+ LG WQL+R A K+AL   +  +  AAP D   +   A   
Sbjct: 7   RGGTIFLVLVTLLVFTILVKLGLWQLDRAAEKQALQQALTVKQAAAPLDYQGLLALAESE 66

Query: 68  SLTREEDEYRRVKVRGTFDHAKEALVYTVRGEDAAGPVKGQGFLVVTPLIRADGPPILVN 127
           SLT       R++V+ T   A   L+     E   G +  Q   V T    AD P +LV 
Sbjct: 67  SLTG-----YRLEVQATPVDAPIILLDNQVYEGHVGYLAYQVMRVETE-SEADDPLLLVE 120

Query: 128 RGFVPSDRRDPATRAEGEIKGEVEVVGLL--RFPEEASWFVPANDPAHGSFYRMEPAEIA 185
            GF+ S           ++  EV + G +  R     S  + A   +      +   E++
Sbjct: 121 LGFIDSGLDRQKLPQLTKLSREVTLSGRVYQRASNPLSQHLLAETGSPMRIQNLNLPELS 180

Query: 186 AARGISGAAPFLIDADATPVPGGLPIGGGTRIAFPNRHLEYALTWYGLAASLVGVGIAVF 245
              G+   AP ++  +A P    LP           +H  YAL W+ +A + + +   + 
Sbjct: 181 QTLGLP-LAPAILQPEAIP-GSALPHPWQPIPMSALKHQGYALQWFSMATAFLILMAYLL 238

Query: 246 ISRRR 250
           I +R+
Sbjct: 239 IFKRK 243