Pairwise Alignments

Query, 434 a.a., NADH-quinone oxidoreductase chain 1 from Xanthobacter sp. DMC5

Subject, 892 a.a., electron transport complex, RnfABCDGE type, C subunit from Pseudomonas stutzeri RCH2

 Score = 42.7 bits (99), Expect = 5e-08
 Identities = 54/202 (26%), Positives = 81/202 (40%), Gaps = 21/202 (10%)

Query: 37  EKGRDWIINEMKASGLRGRGGAGFSTGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRE 96
           E  R  ++  ++ +G+ G GGAGF T +K S  P Q+      L++N  E EP    D  
Sbjct: 123 ELERPALLELIRQAGISGLGGAGFPTAVKLSPPPTQT---IRTLIINGTECEPYITADDL 179

Query: 97  IMRNDPHTLIEGCLIASFAMGAHAAYIYIRGEYIFERERLQAAVDQAYEARLIGKDNVHD 156
           +MR     L+ G              I I    I  +E L    D   EA    +  + +
Sbjct: 180 LMREKAAQLVAG--------------IEILAHLIQPQEVLIGIEDNKPEAIAAVRAAIGE 225

Query: 157 YPFDLYVHHGAGAYICGEETALLESLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAV 216
            PF L V      Y  G E  L++ L G++ +P    P    M      T V   +++ +
Sbjct: 226 RPFVLKVF--PTKYPSGGEKQLIQILTGEE-VPSGGLPADIGMLCQNVGTCVAIHDAVLL 282

Query: 217 A-PTILRRGAAWFSSIGRPNNV 237
             P I R       ++ RP NV
Sbjct: 283 GKPLISRITTLTGEALARPMNV 304