Pairwise Alignments

Query, 202 a.a., NADH-quinone oxidoreductase subunit J from Xanthobacter sp. DMC5

Subject, 166 a.a., NuoJ2 NADH:quinone oxidoreductase subunit 6 (chain J) from Sinorhizobium meliloti 1021

 Score =  105 bits (263), Expect = 4e-28
 Identities = 67/167 (40%), Positives = 104/167 (62%), Gaps = 16/167 (9%)

Query: 7   FFYLFAFVLVASAFMVISSRNPVQSVLFLILAFVNAAGLFILIGAEFLALILVVVYVGAV 66
           FF LFA V V +A  ++ +RNPV S L L+  F+  + +F+++GA  LA+I + VYVGA+
Sbjct: 5   FFLLFATVSVVTALTLVLARNPVHSALALMACFLQISAIFVMLGAPLLAVIQIFVYVGAI 64

Query: 67  AVLFLFVVMMLDVDFVELRQGFLQ-YLPVGVVVGLIFL----AELVLVVGAWVTGPGVSS 121
            VLFLFV+MM+DV     R+  LQ ++P G +  L  L    AE+V++V  W +   + S
Sbjct: 65  MVLFLFVIMMVDV-----REAVLQRFMPGGNLPALALLVLLGAEMVVLV-LW-SDRFIES 117

Query: 122 AVKSSPGGIATESNVRAIAQVLYTDYIYFFQAAGFVLLVAMIGAIVL 168
              +  GG A    +R +++ L++DY+  F+ A  +LL A++GAIVL
Sbjct: 118 PPVAERGGDA----IRDLSKTLFSDYLLPFEVASVILLAALVGAIVL 160