Pairwise Alignments

Query, 641 a.a., NADH-quinone oxidoreductase subunit L from Xanthobacter sp. DMC5

Subject, 643 a.a., NADH-plastoquinone oxidoreductase, chain 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  780 bits (2013), Expect = 0.0
 Identities = 378/638 (59%), Positives = 470/638 (73%), Gaps = 2/638 (0%)

Query: 1   MYQAIVFLPLLGFLIAGLFGKKIGDRASEVVTTSFLFVACLLSWIAFFSVGFGDHDTRVQ 60
           +Y   VFLPLL  +  G FG+ +GD+ ++ +T   + ++ L SW  FF    G ++T V 
Sbjct: 2   LYFLAVFLPLLTAIATGFFGRALGDKGAQRLTCLGMAISALFSWFIFFDTALGGNNTTVT 61

Query: 61  VMKWIYVGDLKVDWAFRIDTMTVIMLIVVTTVSSLVHLYSIGYMHEDPSRPRFFAYLSLF 120
           +  W+  GDL  DWA +IDT++ +ML+VVTT+S +VH+YS+GYMH D S PRF AYLSLF
Sbjct: 62  LFTWVISGDLHFDWALKIDTLSAVMLMVVTTISFMVHIYSVGYMHHDASVPRFMAYLSLF 121

Query: 121 TFAMLMLVTADNLLQLFFGWEGVGLASYLLIGFWYEKPSANAAAMKAFVVNRVGDFGFML 180
           TF MLMLVTADNL+Q+FFGWEGVGLASYLLIGFWYEKPSANAAA+KAFVVNRVGDFGF L
Sbjct: 122 TFFMLMLVTADNLVQMFFGWEGVGLASYLLIGFWYEKPSANAAAIKAFVVNRVGDFGFTL 181

Query: 181 GIFAIFVMTGSIAFEEVFAAAPGLAGKTITFLGHHWDAPTVIALLLFVGACGKSAQFLLH 240
           GIF +F + G++  + +FA A   A   +TF G  W A T++ LLLF+GA GKSAQ  LH
Sbjct: 182 GIFGVFFVFGTVGLDAIFAGAAQHANDVVTFFGIEWHAMTILCLLLFIGAMGKSAQLGLH 241

Query: 241 TWLPDAMEGPTPVSALIHAATMVTAGVFMVARMSPIFELSQTALNVVMLVGATTAFFAAT 300
           TWLPDAMEGPTPVSALIHAATMVTAGVFMVARMSP+F LS TA+ VV +VGA+TA FAAT
Sbjct: 242 TWLPDAMEGPTPVSALIHAATMVTAGVFMVARMSPLFVLSDTAMTVVTIVGASTAIFAAT 301

Query: 301 VGLVQNDIKKVIAYSTCSQLGYMFVAMGAGAYSIGMFHLLTHAFFKALLFLGAGSVIHAM 360
           VG VQNDIK+VIAYSTCSQLGYMF A+G GA+  G+FHL+THAFFKALLFLGAGSVIHAM
Sbjct: 302 VGCVQNDIKRVIAYSTCSQLGYMFFALGVGAFGAGIFHLMTHAFFKALLFLGAGSVIHAM 361

Query: 361 HHEQDMRHMGGLRKKIPFTYWTMVIGTLAITGFPFLAGYYSKDAIIEAAYASHNYFHVYG 420
             EQDMR MGG+ + +P TY  M IG+LA+ G P  AG++SKD I+E AYA+H     Y 
Sbjct: 362 SDEQDMRRMGGIWRMVPLTYALMWIGSLALMGVPPFAGFFSKDMILEVAYAAHGGAGAYA 421

Query: 421 YWMTVIAAALTAFYSWRLIFLTFWGHPH-DHHHYEAAHESPLVMTIPLAVLSLGAIFAGW 479
           +W+ ++AA LTAFYS RLI +TF G P  D H     HESP VMT+PL VL++GA+ AG 
Sbjct: 422 FWLGILAATLTAFYSTRLIIMTFHGAPRADEHVMAHVHESPRVMTLPLIVLAIGAVVAGG 481

Query: 480 AFHGIFVGHGVEHFFRHSIFMGAENHILHAMHEIPGWAAYMPTVMMVIGSLFAIWFYLVN 539
                F+G G   F+  +I   AE+ + H  H++PGW   +P V+  +G    ++ Y V 
Sbjct: 482 LGADAFIGDGRFAFWGTAIAQSAED-VTHHAHDVPGWVKLLPLVVTALGVGLGVFLYGVR 540

Query: 540 PKVPVQLAKSQDALYQFLLNKWYFDEIYNFLFVRPALWLGRTLWKRGDGTIIDGFGPDGV 599
           PK+P +LA S   LY+FLLNKWYFDE+Y+ +F++PA  LGR  WK GDG IIDG GPDGV
Sbjct: 541 PKLPAKLAASAPGLYRFLLNKWYFDELYDRIFIKPAFLLGRGFWKDGDGAIIDGVGPDGV 600

Query: 600 SARVLDITRGVVRLQTGYLYHYAFVMLIGVAALITWFM 637
           ++    + R   R+QTGYLYHYAF M+ G+A ++TW M
Sbjct: 601 ASATRSLARWFGRMQTGYLYHYAFAMITGIAGVVTWVM 638