Pairwise Alignments

Query, 476 a.a., NADH-quinone oxidoreductase subunit N from Xanthobacter sp. DMC5

Subject, 496 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Synechococcus elongatus PCC 7942

 Score =  121 bits (303), Expect = 6e-32
 Identities = 109/413 (26%), Positives = 199/413 (48%), Gaps = 30/413 (7%)

Query: 81  LVSIGALVSLIMSVDWQAREKQAKFEYAVLVVI--ATLGMFMLVSAGDLIALYLGLELMS 138
           LV + AL++ ++    + +E++++  Y +++++  A  G F+   A DL+  ++  E+  
Sbjct: 84  LVGLNALLTFLIIAGLERQEQRSRLYYGLMLLLSGAVSGAFL---AQDLLLFFVFYEVEL 140

Query: 139 LSLYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGASLIYGFTGSVNFL---QIAAVA 195
           + LY++ +I     R   A  K+ +  ALS  +LL G   +   +G+ +F     +AAV 
Sbjct: 141 IPLYLLISI-WGGARRGYAATKFLIYTALSGALLLIGFLALTILSGAGSFAYNPNLAAVL 199

Query: 196 KEPSIGLIFGLVFLVAGLCFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAGMAIFVR 255
             P    +  LV ++     K   VPFH W PD +  A TPV+   A      G    +R
Sbjct: 200 --PIAQQVTLLVLILVAFGIKTPIVPFHTWLPDAHVEASTPVSMMLAGVLLKLGTYGILR 257

Query: 256 VLIEAFPHVSHQWQQIVAFVSLASMVLGAFAAIGQRNIKRLLAYSSIGHMGFALVGLAAG 315
             +  FP V       +A +++ S + G+ +AI Q+++K+++AYSSIGHMG+ L+  AA 
Sbjct: 258 FGLGLFPQVWPIVAPWLAGLAVVSTLYGSLSAIVQQDMKKMVAYSSIGHMGYILLAAAAA 317

Query: 316 TAEGVRGVLVYMAIYLMMTLGTFACV--LTMRRKGQAVETVDDLAGLARRNPLMALMLGA 373
           T   + G +  M  + +++   F  V  +  R   + +  +  L    R  P++  ++  
Sbjct: 318 TPLSLLGAVCQMISHGLISALLFLEVGFVYSRTGTRDLRVLQGLLTPERGLPIVGSLMIL 377

Query: 374 LMFSLAGIPPLAGFLAKYYVFVAAIQAGLYGLSVVGVLASVVG----AFYYLRIVKIMYF 429
            + +  G+P + GF+A++ +F      G +    V  L  +VG    + Y+L +V   +F
Sbjct: 378 AVMASGGLPGMVGFIAEFMIF-----RGSFSTFTVQTLFCMVGTGLTSVYFLLLVNRAFF 432

Query: 430 DEPVDAFDPMPT----ELKAVLAVSGLFTIFYFVYPAPLI---EAASAAARSL 475
               D  + +P     E    L ++ L  IF  V P  L+   E A+AA  +L
Sbjct: 433 GRLPDQMETLPNVALREHIPALMLATLIVIF-GVQPQWLVVWTEPATAALGNL 484