Pairwise Alignments

Query, 476 a.a., NADH-quinone oxidoreductase subunit N from Xanthobacter sp. DMC5

Subject, 502 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  155 bits (391), Expect = 4e-42
 Identities = 147/499 (29%), Positives = 239/499 (47%), Gaps = 35/499 (7%)

Query: 5   LPPLGAVLPELVLAVSAIVLILIGAFRGEGSANLVTGLAIAVLAAAGVLV----LLQPGT 60
           LP L  V+P L+ A   I+L   G          +T L +AV   AGVL         G 
Sbjct: 6   LPILQVVVP-LMAAPVCILLRRPGLCWAWALLIALTTLTMAVGLLAGVLTHGPSAYHLGD 64

Query: 61  EVSAFNGSLVIDPFGRFMKVLVSIGA-LVSLIMSVDWQAREKQAKFEYAV-LVVIATLGM 118
               +   L +D     + VLV+  A LV +     + A         A  L ++   G+
Sbjct: 65  WSPPWGIELHVDLLSALVLVLVTATASLVIVYARASFAAEIDPGHHTLAYCLFLLCLTGL 124

Query: 119 FMLVSAGDLIALYLGLELMSLSLYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGASL 178
             +   GD   L++ LE+ SLS Y + A+ RD  R+  A   Y +LG + +   + G   
Sbjct: 125 LGMAITGDAFNLFVFLEISSLSSYALVALGRDR-RALYAAYHYLILGTVGATFYVIGIGF 183

Query: 179 IYGFTGSVNFLQIAA--VAKEPSIGLIFGLVFLVAGLCFKVSAVPFHMWTPDVYEGAPTP 236
           +Y  TG++N   +A    A   S   + G+VFL  GL  K++  P H W P  Y  AP+ 
Sbjct: 184 LYMMTGTLNMNDLAQRLPAVAHSRTAVAGVVFLGVGLSLKLALFPLHKWLPAAYSYAPSA 243

Query: 237 VTAFFASAPKVAGMAIFVRVLIEAF-PHVSHQW-------QQIVAFVSLASMVLGAFAAI 288
           V AF A+        + VR+ +    P  S          +++V  ++LA+++ G+F+AI
Sbjct: 244 VGAFLAATSTKVAFYVMVRLFLGVLAPAFSANLLPGPVSAREMVMVLALAAILSGSFSAI 303

Query: 289 GQRNIKRLLAYSSIGHMGFALVGLAAGTAEGVRGVLVYMAIYLMMTLGTFACVLTMRRKG 348
            Q + KRLLAYSS+  +G  ++GL+  + +GV G LV+M  + ++    F  +  +  + 
Sbjct: 304 FQSDAKRLLAYSSVSQIGVMVLGLSLFSLDGVAGGLVHMLNHALIKASLFMALGCVFLRI 363

Query: 349 QAVETVDDLAGLARRNP--LMALMLGALMFSLAGIPPLAGFLAKYYVFVAAIQAGLYGLS 406
            +VE + D+AG+ RR P  + A ++G L  SL GIP  AGF++K+ +  +AI  G + L+
Sbjct: 364 GSVE-IADMAGIGRRMPWTMAAFVIGGL--SLIGIPGTAGFISKWQLAQSAIAEG-WWLA 419

Query: 407 VVGVLASVVGAFYYL-RIVKIMYFDEPVDAFDP---------MPTELKAVLAVSGLFTIF 456
           V  ++AS + A  Y+ ++++  YF  P  A  P          P  + A L ++ L  I 
Sbjct: 420 VAALIASSLLAVVYVGKVIEAAYF-RPSPAESPSGAPSAPQEAPAMMLAPLWIAALANIG 478

Query: 457 YFVYPAPLIEAASAAARSL 475
           + +     +  A  AA +L
Sbjct: 479 FGLNTTWTLGLAKRAASAL 497