Pairwise Alignments

Query, 476 a.a., NADH-quinone oxidoreductase subunit N from Xanthobacter sp. DMC5

Subject, 490 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  123 bits (308), Expect = 2e-32
 Identities = 125/479 (26%), Positives = 212/479 (44%), Gaps = 45/479 (9%)

Query: 4   LLPPLGAVLPELVLAVSAIVLILIGAFRGEGSANLVTGLAIAVLAAAG-VLVLLQPGTEV 62
           L+  L A  P L  A+  I  +L  A         V  L   VLA     LV+L     +
Sbjct: 21  LVIALNAKRPRLGEAIGVIAALLTFA--------QVAALTPTVLAGGRPTLVMLSVMDTI 72

Query: 63  SAFNGSLVIDPFGRFMKVLVSIGALVSLIMSVDWQAREKQAK----FEYAVLVVIATLGM 118
                   +DP G    ++ +   + + + S+ +     +A       Y  L +  TLG+
Sbjct: 73  PLV---FTLDPLGLLFALVAAALWIPAGLYSIAYLRANHEAHQPRFHAYFALAIACTLGI 129

Query: 119 FMLVSAGDLIALYLGLELMSLSLYVVAAINRDSVRSTEAGLKYF-VLGALSSGMLLYGAS 177
            +   AG+L  L+L  E ++LS Y +   ++ + ++  AG  Y  +L   S G+LL    
Sbjct: 130 AL---AGNLFTLFLFYEALTLSTYPLIT-HQGTAQAVRAGRIYMGMLLVPSIGLLLVAII 185

Query: 178 LIYGFTGSVNFLQ---IAAVAKEPSIGLIFGL-VFLVAGLCFKVSAVPFHMWTPDVYEGA 233
           L +   G ++F     +A     P +GL+  L VF  A    K + +PFH W P     A
Sbjct: 186 LTHSLAGRMDFQPGGILAGRIDGPLVGLLLALFVFGTA----KAALMPFHRWLPAAMV-A 240

Query: 234 PTPVTAFFASAPKV-AGMAIFVRVLIEAFPH---VSHQWQQIVAFVSLASMVLGAFAAIG 289
           PTPV+A   +   V AG+    +V+I  F      +  W   + +V+  S++L +  A+ 
Sbjct: 241 PTPVSALLHAVAVVKAGVFTIAKVVISIFGIDLLAASSWTGWLTWVAGISVILASLIALR 300

Query: 290 QRNIKRLLAYSSIGHMGFALVGLAAGTAEGVRGVLVYMAIYLMMTLGTF---ACVLTMRR 346
           Q N+KR LAYS+I  + + ++ L+  +  GV    +++ ++    +  F     + T   
Sbjct: 301 QDNLKRRLAYSTISQLAYVVMALSLFSPLGVLAAGLHIVVHAFGKITLFFAAGAIHTATH 360

Query: 347 KGQAVETVDDLAGLARRNPLMALMLGALMFSLAGIPPLAGFLAKYYVFVAAIQAGLYGLS 406
           K    ++V   AG+ R  P           S+ G+PP AGFL+K+ +F AA Q   +G+ 
Sbjct: 361 K----DSVSQFAGIGRAMPWTMGAFAVASLSMIGLPPTAGFLSKWGIFSAAFQGQTWGVV 416

Query: 407 VVGVLASVVGAFYYLRIVKIMYFDEPVD----AFDPMPTELKAVLAVSGLFTIFYFVYP 461
            V + ++V+ A Y+L I+   +   P           P  + A L ++   T+  F  P
Sbjct: 417 AVLIASTVLNAAYFLPILHTAFLKPPPGEAGAKIAEAPPLMVAALCLTAFGTLALFFLP 475