Pairwise Alignments

Query, 476 a.a., NADH-quinone oxidoreductase subunit N from Xanthobacter sp. DMC5

Subject, 487 a.a., NADH dehydrogenase I, N subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  224 bits (571), Expect = 5e-63
 Identities = 151/477 (31%), Positives = 249/477 (52%), Gaps = 20/477 (4%)

Query: 2   SQLLPPLGAVLPELVLAVSAIVLILIGAFRG-EGSANLVTGLAIAVLAAAGVLVLLQPGT 60
           SQLL    A+LP L+   +   L+L  A+R    +A  VT + + +   +  +V+ Q   
Sbjct: 6   SQLL----ALLPLLLTTGAMAALMLAIAWRRCVTTAFTVTIVGLNMALFSLPIVMAQGDQ 61

Query: 61  EVSAFNGSLVIDPFGRFMKVLVSIGALVSLIMSVDWQAREKQAKFEYAVLVVIATLGMFM 120
            V+     L +D +  F   LV IGAL +      W       + E+ +L++IAT G  +
Sbjct: 62  GVTPL---LQVDSYAVFYMGLVLIGALATCTFGQSWLKAYPDNREEFFLLLLIATAGGLV 118

Query: 121 LVSAGDLIALYLGLELMSLSLYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGASLIY 180
           L  +  L +L++G+E+++L ++ +         S EA +KY VL A ++  LL+G +L+Y
Sbjct: 119 LACSRHLASLFIGIEMLTLPMFGLVGYAYRERHSLEAAVKYMVLSAAATAFLLFGMALLY 178

Query: 181 GFTGSVNFLQIA-AVAKEPSIG--LIFGLVFLVAGLCFKVSAVPFHMWTPDVYEGAPTPV 237
              GS++F  +   +A+ P+    L+ GL  ++ G  FK+S  PFH+WTPDVYEGAP PV
Sbjct: 179 AQAGSLSFAALGQTLAESPAHHPLLMGGLGLMLVGFAFKLSLAPFHLWTPDVYEGAPAPV 238

Query: 238 TAFFASAPKVAGMAIFVRVLIEAFPHVSHQWQQIVAFVSLASMVLGAFAAIGQRNIKRLL 297
             F A+  KVA  A+ +R  +            ++A +++ S+++G   A+ Q N+KR+L
Sbjct: 239 ATFLATVSKVAVFAVLLRFYLAVPAASDPMIHWLLAAMAVISILVGNLLALVQTNVKRML 298

Query: 298 AYSSIGHMGFALVGLAAGT--AEGVRGVLVYMAIYLMMTLGTFACVLTMRR--KGQAVET 353
            YSSI H G+ L  + A       V    VY+ +YL  +LG F  V  M    +G+  ++
Sbjct: 299 GYSSISHFGYLLAVIVASRIGQMPVEAAGVYLLMYLFTSLGAFGVVSMMSSPYRGKDADS 358

Query: 354 VDDLAGLARRNPLMALMLGALMFSLAGIPPLAGFLAKYYVFVAAIQAGLYGLSVVGVLAS 413
           +    GL  + P +  +L  +M SLAGIP   GF+ K+Y+    ++A L+ LS   VL S
Sbjct: 359 LHSYRGLFWKRPYLTAVLTVMMLSLAGIPMTLGFIGKFYLIGVTVEAQLWWLSGAIVLGS 418

Query: 414 VVGAFYYLRIVKIMYFDEP-----VDAFDPMPTELKAVLAVSGLFTIFYFVYPAPLI 465
            +G +YYL+++  +Y  EP       + D   +    V+ +S    +   +YP P+I
Sbjct: 419 ALGLYYYLKVMVTLYLREPGMQQRDASADWALSSGGVVVLLSAALVVLLGLYPQPVI 475