Pairwise Alignments

Query, 476 a.a., NADH-quinone oxidoreductase subunit N from Xanthobacter sp. DMC5

Subject, 511 a.a., NADH dehydrogenase (quinone) (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  139 bits (349), Expect = 3e-37
 Identities = 119/487 (24%), Positives = 226/487 (46%), Gaps = 34/487 (6%)

Query: 11  VLPELVLAVSAIVLILIGAFRGEGSANLVTGLAIAVLAAAGVLVL----------LQPGT 60
           V P ++  ++A++ +L+   R    A  V+ L    L  +G+++L           Q G 
Sbjct: 4   VWPIVIPMITAVITLLL---RKTALAYHVSLLGSVALLGSGLILLRAVLTGGPMAAQMGG 60

Query: 61  EVSAFNGSLVIDPFGRFMKVLVSIGALVSLIMS-VDWQAREKQAKFE---YAVLVVIATL 116
             + F  +L  D     M V+  I A+  ++ S  D    EK+  F    +A+LV +   
Sbjct: 61  WEAPFGITLFADILSAAMVVIAGIVAVAVIVYSRFDVTEDEKRVGFHALSHALLVGVC-- 118

Query: 117 GMFMLVSAGDLIALYLGLELMSLSLYVVAAIN--RDSVRSTEAGLKYFVLGALSSGMLLY 174
           G F+    GD+  LY+  E+M ++ + +  I   RD +   +A +KY  L  +++   L 
Sbjct: 119 GAFL---TGDIFNLYVWFEVMLIASFGLLVIGGRRDQI---DAAVKYVGLNLVATLAFLT 172

Query: 175 GASLIYGFTGSVNF--LQIAAVAKEPSIGLIFGLVFLVAGLCFKVSAVPFHMWTPDVYEG 232
           G  ++YG  G++N   L +    ++    ++     L+     K +  P   W P  Y  
Sbjct: 173 GVGILYGAAGTLNMADLHLVLADRQSETAVLASAALLLFAFGAKAAMFPVFAWLPASYHT 232

Query: 233 APTPVTAFFASAPKVAGMAIFVRVLIEAFPHVSHQWQQIVAFVSLASMVLGAFAAIGQRN 292
                +A FA+     G+   +RV    +       Q I+   ++ +MV+G   A  Q +
Sbjct: 233 PAFATSALFAALLTKVGVYALLRVFTVVYDGGGGFIQPILLIGAVLTMVIGVLGAAAQND 292

Query: 293 IKRLLAYSSIGHMGFALVGLAAGTAEGVRGVLVYMAIYLMMTLGTFACVLTMRRKGQAVE 352
           ++R+L++  I  +G+ ++GLA  T   + G + Y+  ++++    F     ++ K  + E
Sbjct: 293 VRRILSFHIISQIGYMVLGLALFTPLAIIGAIFYLFHHIIVKANLFFVAGLIKLKAGS-E 351

Query: 353 TVDDLAGLARRNPLMALMLGALMFSLAGIPPLAGFLAKYYVFVAAIQAGLYGLSVVGVLA 412
            +D + GL + +P +A++      SLAGIPPL+GF AK+ +  A+++A  + +++  +  
Sbjct: 352 ELDKIGGLLKASPFLAILFLIPALSLAGIPPLSGFWAKFIIVQASLEARDWWVALAALAV 411

Query: 413 SVVGAFYYLRI-VKIMYFDEPVDAF---DPMPTELKAVLAVSGLFTIFYFVYPAPLIEAA 468
            ++  F   +I +   + D P  AF     MP  + A +AV  + T+   +   PL   A
Sbjct: 412 GLITLFSMTKIWLAAFWKDHPDAAFAKGPVMPRSMTAPIAVLAVMTVIIGLGAGPLYTVA 471

Query: 469 SAAARSL 475
             AA +L
Sbjct: 472 EEAAITL 478