Pairwise Alignments
Query, 1256 a.a., hypothetical protein from Xanthobacter sp. DMC5
Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H
Score = 601 bits (1549), Expect = e-175
Identities = 322/685 (47%), Positives = 438/685 (63%), Gaps = 6/685 (0%)
Query: 546 ISARRAAEAALRESEERFGLAVKGSDQGVWDLNVRTGSLYLSQRAREMLGVGPDEAVDIR 605
I+ R + LRESE RF + + G+ L+ L ++ + +++G PDE + +
Sbjct: 612 IADHRRKQMVLRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLS 671
Query: 606 RPWHELLHPDDRRKVAPAWKAFLSGGVPTLELDIRLRRPDGSYHDFRWNGLAARDAAGTI 665
+ ++ HPDD R +A L+G + T ++ R R G RD
Sbjct: 672 --FQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNAP 729
Query: 666 SRAVGLLADITSSKQTERHLRLAAAVFANSHDGLVVTNLKSEVSAVNPAFSRITGYAEEE 725
+ + ++ +I S K+ E L LA+AVF+NS +G+ VT+LK + AVNPAFS+IT Y E
Sbjct: 730 AYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAE 789
Query: 726 ILGQNMRLLHSGRHDREFYRSLWSELTTAGIWQGEIWNRRKNGEIFLQQLNISTVYDDSG 785
+LG+N R+L SGR +REFY +LW ++ T G W+GEIWNRR++GE+F + L+IS+V + G
Sbjct: 790 VLGRNARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQG 849
Query: 786 AAQNFVGAFQDITQAKHSEFELDRIAHYDPLTDLPNRTLLASLLDLAVSRP---GSRCAV 842
N++G F D+++ KHSE + +AH+DPLT LPNR LL S LD A+ R G RCAV
Sbjct: 850 EVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERARRTGGRCAV 909
Query: 843 LFVDLDRFKTVNDSLGHMAGDAVLQMAAQRIQDELEAGATLGRHGGDEFVIILEGISGPE 902
LF+DLDRFK +NDSLGH AGD +L+ R+ L TL R GGDEFV ++E I G
Sbjct: 910 LFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAVIEDIDGIP 969
Query: 903 DAATLANHVIQQMGRPFSMPGGGEIYLGASVGISLFPEDADTPASLLQHADSALAEAKSH 962
T+A +++++ P + G E+ +G SVGISLFPED D P +LLQHAD+AL + K
Sbjct: 970 AVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALGQVKGA 1029
Query: 963 GRGGYAFYTQALTRGARVRMEMEADLRRALARDEFILNFQPVVNLATGRITGTEALVRWQ 1022
G G Y FYT+ LT R+ +EA LR AL + +F+L++QP++ L TG + G EALVRW
Sbjct: 1030 GGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVEALVRWA 1089
Query: 1023 SPTHGLVTPNRFIPLAEETGLIEPLGNWVMEAACRQMAEWLDKGADLDFIAVNLSPRQFQ 1082
L+ P+RFIPLAE+TGLI PLG WV+ ACR M W +G L +AVNLSPRQF+
Sbjct: 1090 GGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLAVNLSPRQFR 1149
Query: 1083 RGALCEFVDDVLRRTGLPAHKLEVEITESLLFDARAAAERKLRQLKDTGVRIALDDFGTG 1142
A+ V VL +TGLPA LE+EITES + + AAAE ++ LK GVR+A+DDFGTG
Sbjct: 1150 DHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVRLAIDDFGTG 1209
Query: 1143 YSSLAYLKRFPISKLKIDRSFVRDLPR-AADAEIATAIISIARALGFSVVAEGIEDPRQH 1201
YSSLA L+RFPI K+KID+SFVRD+PR AA EI II++ R L V+AEG+E Q
Sbjct: 1210 YSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGVETTDQL 1269
Query: 1202 DFLKARGCDFGQGHLFSRAVTGERL 1226
DFL + CD QG+LFSR +T L
Sbjct: 1270 DFLSRKQCDSAQGYLFSRPITAAAL 1294
Score = 91.7 bits (226), Expect = 4e-22
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 25/261 (9%)
Query: 431 EAEARFRAAFDQAATGILHLDLDGTILRANDKACRMLGRPASALTGERLWQLRSPDHAAA 490
E+EARFRA F+QAA GI HLD DG LR N K C ++G P L + PD A
Sbjct: 624 ESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLSFQDITHPDDLRA 683
Query: 491 GADVIRPLLDGRIAEIETEESLVHPDGSAVWLAFTFSLVRNADGAADHLLLVAQDISARR 550
+ LL G+I E+ + G ++W+ T SLVR+ A + + V ++I +R+
Sbjct: 684 DLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNAPAYFISVVENIQSRK 743
Query: 551 AAEAALRESEERFGLAVKGSDQGVWDLNVRTGSLYLSQRAREMLGVGPD-------EAVD 603
AE L + F +++G ++++ +L V P EA +
Sbjct: 744 EAELQLLLASAVFSNSMEG--------------IFVTDLKGSILAVNPAFSQITLYEAAE 789
Query: 604 IRRPWHELLHP--DDRRKVAPAWKAFLSGGVPTLELDIRLRRPDGSYHDFRWNGLAARDA 661
+ +L +R W+ L+ G + +I RR DG + + R+
Sbjct: 790 VLGRNARILQSGRQNREFYVALWQDVLTIG--SWRGEIWNRRRDGEVFPEWLSISSVRNH 847
Query: 662 AGTISRAVGLLADITSSKQTE 682
G ++ +G+ +D++ K +E
Sbjct: 848 QGEVTNYIGIFSDLSRIKHSE 868