Pairwise Alignments

Query, 1256 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  371 bits (953), Expect = e-107
 Identities = 235/578 (40%), Positives = 323/578 (55%), Gaps = 24/578 (4%)

Query: 668  AVGLLADITSSKQTERHLRLAAAVFANSHDGLVVTNLKSEVSAVNPAFSRITGYAEEEIL 727
            AV  + +I   ++  R   LA      +HDG+   N  S+          I GY E  ++
Sbjct: 65   AVCSVREIVILRRAARAYELA---MEGAHDGMWTWNPLSKELTAGQRLHAILGYGENFLM 121

Query: 728  GQNMRLLHSGRHDREFYRSLWSE----LTTAGIWQGEIWNRRKNGEIFLQQLNISTVYDD 783
              +  L      D   Y    SE    LT     +  +  R K+GE          V D 
Sbjct: 122  DTHAWLTLVHPEDTARYNRAVSEHLKGLTPHFYCEYRV--RAKSGEYRWIASRGIAVRDA 179

Query: 784  SGAAQNFVGAFQDITQAKHSEFELDRIAHYDPLTDLPNRTLLASLLDLAVSRPG---SRC 840
             G A    G+  DIT+ K  E  +  +AH+D LT LPNR LLA  L  A++R     SR 
Sbjct: 180  RGVATLMAGSVTDITERKLHEERMRYLAHHDQLTGLPNRLLLADRLPQALTRAKRQQSRA 239

Query: 841  AVLFVDLDRFKTVNDSLGHMAGDAVLQMAAQRIQDELEAGATLGRHGGDEFVIILEGISG 900
            AVLFVDLDRFK +NDSLGH  GD +LQ  A+R+Q+ L    T+ R GGDEF++ILE +  
Sbjct: 240  AVLFVDLDRFKNINDSLGHNQGDRLLQSVARRLQECLRQSDTIVRQGGDEFIVILEDLQL 299

Query: 901  PEDAATLANHVIQQMGRPFSMPGGGEIYLGASVGISLFPEDADTPASLLQHADSALAEAK 960
            PE A  +   +++ +  P+    G + +L AS+GI+L+P+D D   +LL++AD+A+ E K
Sbjct: 300  PEQAGQIGAKLLETLASPYR-EDGYDFFLTASIGIALYPDDGDDADTLLRNADTAMYEGK 358

Query: 961  SHGRGGYAFYTQALTRGARVRMEMEADLRRALARDEFILNFQPVVNLATGRITGTEALVR 1020
            S G     FYT  +    + R+ +E  LRRAL RDE  L +QP ++LA+GR+ G EAL+R
Sbjct: 359  SSGGNTVRFYTGRMNERLQSRVSLENGLRRALERDELQLYYQPQIDLASGRLLGAEALLR 418

Query: 1021 WQSPTHGLVTPNRFIPLAEETGLIEPLGNWVMEAACRQMAEWL-------DKGADLDFIA 1073
            W      L+ P++FIP+AEETGLI P+G WV++ A  + A W          GA    IA
Sbjct: 419  WNDGGR-LIPPDQFIPVAEETGLIVPIGLWVLDTAIARAAAWRRHWQLRQGMGATPPRIA 477

Query: 1074 VNLSPRQFQRGALCEFVDDVLRRTGLPAHKLEVEITESLLFDARAAAERKLRQLKDTGVR 1133
            +NLS RQF  G + E V   L R GLP   +E+E+TES+L    A    +LR+L++ GV 
Sbjct: 478  INLSARQFWGGGIAEHVLLRLEREGLPPSTIELEVTESVLLRQEADCLEELRRLREAGVG 537

Query: 1134 IALDDFGTGYSSLAYLKRFPISKLKIDRSFVRDLPRAADAE---IATAIISIARALGFSV 1190
            +ALDDFGTGYSSL+YL+  PI  LKID+SF+  L    D E   I  AI+++A  LG  V
Sbjct: 538  LALDDFGTGYSSLSYLRLLPIDTLKIDKSFIFPLDEDQDGEAAAIVRAILAMAHTLGHKV 597

Query: 1191 VAEGIEDPRQHDFLKARGCDFGQGHLFSRAVTGERLLR 1228
            VAEG+E   Q + L+  GCD  QG+L SR +  E  L+
Sbjct: 598  VAEGVERQTQLELLRTMGCDSFQGYLESRPLPPEAFLQ 635



 Score = 70.1 bits (170), Expect = 6e-16
 Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 1/134 (0%)

Query: 556 LRESEERFGLAVKGSDQGVWDLNVRTGSLYLSQRAREMLGVGPDEAVDIRRPWHELLHPD 615
           LR +   + LA++G+  G+W  N  +  L   QR   +LG G +  +D    W  L+HP+
Sbjct: 75  LRRAARAYELAMEGAHDGMWTWNPLSKELTAGQRLHAILGYGENFLMDTHA-WLTLVHPE 133

Query: 616 DRRKVAPAWKAFLSGGVPTLELDIRLRRPDGSYHDFRWNGLAARDAAGTISRAVGLLADI 675
           D  +   A    L G  P    + R+R   G Y      G+A RDA G  +   G + DI
Sbjct: 134 DTARYNRAVSEHLKGLTPHFYCEYRVRAKSGEYRWIASRGIAVRDARGVATLMAGSVTDI 193

Query: 676 TSSKQTERHLRLAA 689
           T  K  E  +R  A
Sbjct: 194 TERKLHEERMRYLA 207