Pairwise Alignments
Query, 1256 a.a., hypothetical protein from Xanthobacter sp. DMC5
Subject, 1072 a.a., sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 431 bits (1109), Expect = e-124
Identities = 298/830 (35%), Positives = 418/830 (50%), Gaps = 66/830 (7%)
Query: 446 GILHL-DLDGTILRANDKACRMLGRPASALTGERLWQLRSPDHAAA--GADVIRPLLDGR 502
G+L L D +G + N +L P G +L P+ AA AD R +G
Sbjct: 250 GLLALTDFEGRVQLLNKAGHTLLRLPDGIARGRHRAELL-PERIAALLAADNERMQREGT 308
Query: 503 IAEIETEESLVHPDGSAVWLAFTFSLVRNADGAADHLLLVAQDISARRAAEAALRE---- 558
+++E DGS VR+ G + VA +ISA + EA LR+
Sbjct: 309 PSQLEVTLPRYGHDGSDRTFLVQRFPVRDHSGGMQGVGTVAMEISALKNTEAGLRQRLTN 368
Query: 559 ---------------------SEERF---------GLAVKGSDQGVWDLNVRTGSLYLSQ 588
S RF GL ++ D + D N R L
Sbjct: 369 IEAMVATRTEELRVANEALHRSSTRFRALFDYAPDGLLLQRDDGTLLDCN-RMAEATLGL 427
Query: 589 RAREMLGVGPDEAVDIRRPWHELLHPDDRRKVAPAWKAFLSGGVP-TLELDIRLRRPDGS 647
E+L + +A DI R H L P+ L GGV E+ +R
Sbjct: 428 SRHELLAL---KARDICREGHALPVPESEDTPLRTRTELLRGGVAFPAEVSVR------- 477
Query: 648 YHDFRWNGLAARDAAGTISRAVGLLADITSSKQTERHLRLAAAVFANSHDGLVVTNLKSE 707
+ D G + V L DI+S TE L L VF N+ +G+++T+
Sbjct: 478 ----------SLDIEGERTLLVAL-RDISSRIHTEHRLNLFELVFRNALEGILITDASGA 526
Query: 708 VSAVNPAFSRITGYAEEEILGQNMRLLHSGRHDREFYRSLWSELTTAGIWQGEIWNRRKN 767
+ AVNPAF+ ITG+ E + +G+N R+L S RHDR FY LW L G W+GEIWNRR N
Sbjct: 527 ILAVNPAFTTITGWNERDAVGRNPRILKSNRHDRGFYERLWHSLHERGAWEGEIWNRRIN 586
Query: 768 GEIFLQQLNISTVYDDSGAAQNFVGAFQDITQAKHSEFELDRIAHYDPLTDLPNRTLLAS 827
GE + + L+IS + D+SGA N+V F DI+ K E ++ +D LT LPNR LL
Sbjct: 587 GENYPEWLSISAIRDESGATTNYVALFHDISDLKAKEAQIRYQGMHDALTGLPNRALLLE 646
Query: 828 LLDLAVSR---PGSRCAVLFVDLDRFKTVNDSLGHMAGDAVLQMAAQRIQDELEAGATLG 884
L + G C +L++D+D FKT+NDSLGH AGD + A+ + + TL
Sbjct: 647 RLAGELKEGQGTGRLCGLLYIDIDNFKTINDSLGHEAGDKFIAEVAEHLTLLIRPEDTLS 706
Query: 885 RHGGDEFVIILEGISGPEDAATLANHVIQQMGRPFSMPGGGEIYLGASVGISLFPEDADT 944
R GGDE+VI++ + +A ++ +P ++ E+++G S+GI++ P D
Sbjct: 707 RLGGDEYVILVANPGEEREVVLVAERILHHFSQPIALLDR-ELHVGLSIGIAIHPADGKG 765
Query: 945 PASLLQHADSALAEAKSHGRGGYAFYTQALTRGARVRMEMEADLRRALARDEFILNFQPV 1004
P LL +AD A+ AK+ G+ Y ++ L R RME+E LR AL E + +FQP
Sbjct: 766 PDELLTNADLAMYRAKAQGKNTYERFSPHLHDRIRSRMELEGRLRHALRHGEIVPHFQPR 825
Query: 1005 VNLATGRITGTEALVRWQSPTHGLVTPNRFIPLAEETGLIEPLGNWVMEAACRQMAEWLD 1064
V+LATGRI G EAL RW P ++P FIP+AE+ GLI LG ++ ++ +D
Sbjct: 826 VDLATGRIVGAEALARWTLPDGTRISPGEFIPVAEDLGLIFDLGEHMLRSSLAFTRALMD 885
Query: 1065 KGADLDFIAVNLSPRQFQRGALCEFVDDVLRRTGLPAHKLEVEITESLLFDARAAAERKL 1124
+G +AVNLS Q + L V LR TG+P +LE+EITES + R+L
Sbjct: 886 EGLPDITMAVNLSLVQCRHADLVGRVLAALRDTGVPPERLELEITESAIMSDVTRTLRRL 945
Query: 1125 RQLKDTGVRIALDDFGTGYSSLAYLKRFPISKLKIDRSFVRDLPRAADAE-IATAIISIA 1183
+L G+ +A+DDFGTGYSSL +LK P+ LKID+SFVRDLP A + IA ++++A
Sbjct: 946 DRLAALGITLAVDDFGTGYSSLYHLKHMPLHTLKIDQSFVRDLPHVAGSRTIALTMLAMA 1005
Query: 1184 RALGFSVVAEGIEDPRQHDFLKARGCDFGQGHLFSRAVTGERLLRLALSG 1233
R L V+AEG+E Q FL+ GC QG LFS AV G+RL L G
Sbjct: 1006 RNLDLDVIAEGVETGAQMHFLRDHGCRVVQGFLFSPAVPGDRLFDLLRRG 1055
Score = 49.7 bits (117), Expect = 1e-09
Identities = 75/278 (26%), Positives = 114/278 (41%), Gaps = 28/278 (10%)
Query: 425 AARAVSEAEARFRAAFDQAATGILHLDLDGTILRANDKACRMLGRPASALTGERLWQLRS 484
A A+ + RFRA FD A G+L DGT+L N A LG L+ L L++
Sbjct: 383 ANEALHRSSTRFRALFDYAPDGLLLQRDDGTLLDCNRMAEATLG-----LSRHELLALKA 437
Query: 485 PDHAAAGADVIRPLLDGRIAEIETEESLVHPDGSAVWLAFTFSL-VRNADGAADHLLLVA 543
D G + P+ + + T L+ +AF + VR+ D + LLVA
Sbjct: 438 RDICREGHAL--PVPESEDTPLRTRTELLRGG-----VAFPAEVSVRSLDIEGERTLLVA 490
Query: 544 -QDISARRAAEAALRESEERFGLAVKGSDQGVWDLNVRTGSLYLSQRAREMLGVGPDEAV 602
+DIS+R E L F L + + +G+ + L ++ + G +AV
Sbjct: 491 LRDISSRIHTEHRL----NLFELVFRNALEGILITDASGAILAVNPAFTTITGWNERDAV 546
Query: 603 DIRRPWHELLHPDDRRKVAPAWKAFLSGGVPTLELDIRLRRPDGSYHDFRWNGLAA-RDA 661
R P + DR W + G E +I RR +G + W ++A RD
Sbjct: 547 G-RNPRILKSNRHDRGFYERLWHSLHERG--AWEGEIWNRRINGENYP-EWLSISAIRDE 602
Query: 662 AGTISRAVGLLADITSSKQTERHLRLAAAVFANSHDGL 699
+G + V L DI+ K E +R + HD L
Sbjct: 603 SGATTNYVALFHDISDLKAKEAQIR-----YQGMHDAL 635