Pairwise Alignments

Query, 513 a.a., Na(+)/H(+) antiporter subunit D from Xanthobacter sp. DMC5

Subject, 502 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  213 bits (542), Expect = 1e-59
 Identities = 154/499 (30%), Positives = 251/499 (50%), Gaps = 29/499 (5%)

Query: 10  HAIILPVLLPALTAAFLVLALRHHLRRQRIVSLAATGLLLALAIVLFALASDGTVRAYRL 69
           H  IL V++P + A   +L  R  L     + +A T L +A+ ++   L    +  AY L
Sbjct: 5   HLPILQVVVPLMAAPVCILLRRPGLCWAWALLIALTTLTMAVGLLAGVLTHGPS--AYHL 62

Query: 70  GDWPAPYGITLVLDRLSATMLLLTAVLAGCVLIYASGGVDGR---GRHF--HPLFQFQLM 124
           GDW  P+GI L +D LSA +L+L    A  V++YA          G H   + LF   L 
Sbjct: 63  GDWSPPWGIELHVDLLSALVLVLVTATASLVIVYARASFAAEIDPGHHTLAYCLFLLCLT 122

Query: 125 GINGAFLTGDVFNLFVFFEVMLIASYGLMLHGGGPGRLKAGFQYVAINLLASAVFLVGVG 184
           G+ G  +TGD FNLFVF E+  ++SY L+  G     L A + Y+ +  + +  +++G+G
Sbjct: 123 GLLGMAITGDAFNLFVFLEISSLSSYALVALGRDRRALYAAYHYLILGTVGATFYVIGIG 182

Query: 185 LIYAVTGTLNMADLAVKVPQVAPADAALLKTGALLLFLVFATKAALVPLHWWLPATYA-G 243
            +Y +TGTLNM DLA ++P VA +  A+   G + L +  + K AL PLH WLPA Y+  
Sbjct: 183 FLYMMTGTLNMNDLAQRLPAVAHSRTAV--AGVVFLGVGLSLKLALFPLHKWLPAAYSYA 240

Query: 244 TSAPAAALFMIMTKVGAYAIIRVY----GLVFGAGAGPLALAADPFVMPAALATLVVGTV 299
            SA  A L    TKV  Y ++R++       F A   P  ++A   VM  ALA ++ G+ 
Sbjct: 241 PSAVGAFLAATSTKVAFYVMVRLFLGVLAPAFSANLLPGPVSAREMVMVLALAAILSGSF 300

Query: 300 GLVGSRTLRDLSAFAVIASMGTLLIAVGLFDVEGLSAGLYYLVHSTLAGAALFLIAGIVQ 359
             +     + L A++ ++ +G +++ + LF ++G++ GL ++++  L  A+LF+  G V 
Sbjct: 301 SAIFQSDAKRLLAYSSVSQIGVMVLGLSLFSLDGVAGGLVHMLNHALIKASLFMALGCVF 360

Query: 360 EQRGAASDRLIPAPAMGGETL--LGGLFFLAAIALVGLPPLSGFIGKVMILQAVRTSAIW 417
            + G+     I   A  G  +      F +  ++L+G+P  +GFI K  + Q+      W
Sbjct: 361 LRIGSVE---IADMAGIGRRMPWTMAAFVIGGLSLIGIPGTAGFISKWQLAQSAIAEGWW 417

Query: 418 PWIWAAILGASLLMTFGFARAGSVLFWASGPVSERKPLPALPGLAAVMLL----LAAI-- 471
             + AA++ +SLL      +     ++   P       P+ P  A  M+L    +AA+  
Sbjct: 418 LAV-AALIASSLLAVVYVGKVIEAAYFRPSPAESPSGAPSAPQEAPAMMLAPLWIAALAN 476

Query: 472 VGWALAAGPATQALSLAAR 490
           +G+ L     T  L LA R
Sbjct: 477 IGFGL---NTTWTLGLAKR 492