Pairwise Alignments

Query, 281 a.a., putative D,D-dipeptide transport system permease protein DdpC from Xanthobacter sp. DMC5

Subject, 273 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  197 bits (502), Expect = 2e-55
 Identities = 103/261 (39%), Positives = 159/261 (60%), Gaps = 3/261 (1%)

Query: 23  AGAVVLVAIA-VLAPWITPYDPIA-SNVPAALQPPSAAHWAGTDQLGRDIFSRLIAATRL 80
           AG   LV +A +LAPWI P+DP+  +++  +  PP A  W GTD  GRD+++R++   ++
Sbjct: 11  AGLTTLVILAGILAPWIAPFDPVLDADLMNSELPPDATFWFGTDGQGRDVYTRILYGAQI 70

Query: 81  DLGIAVSAVLLSFVAGATIGALCGYAGGRVDRSVGRLVDVLMAFPLFVLAMALVAALGNR 140
            L + + + +++ + G T+G   GY GG  D  V    +V++A P  + A+A++A LG  
Sbjct: 71  SLTVGIVSQVINSIIGVTLGMTAGYWGGWWDDLVNGFTNVMLAIPSLIFALAVMAVLGPG 130

Query: 141 VENIVIATALINLPFYIRFARAEVNVRRHAGWVEAARAGGESHATIVLAYLLPNILPAMA 200
           + +++IA  L N  +  R AR+     +  G+V+AA+  G     I+   +LPN++  + 
Sbjct: 131 LPSLLIALGLTNWSWTCRIARSSTLSLKSLGYVQAAQTLGYGDLRIMFTQILPNMMGPIL 190

Query: 201 VQISLNLGWAILNAAGLSFLGLGVQAPTPEWGIMVAEGARFIGNGQWWLVAFPGLALMLA 260
           V  +L +G A+L+ A LSFLGLG+Q P P WG M+ +  + I     W+  FPGLA+ L+
Sbjct: 191 VMATLGMGSAVLSEAALSFLGLGIQPPFPSWGSMLTDARQLIQLAP-WVAIFPGLAIFLS 249

Query: 261 VLCFNLLGDGLRDILDPRMRT 281
           VL FNLLGDGLRD LDP MRT
Sbjct: 250 VLGFNLLGDGLRDSLDPHMRT 270