Pairwise Alignments

Query, 454 a.a., Ribosomal RNA small subunit methyltransferase B from Xanthobacter sp. DMC5

Subject, 416 a.a., tRNA and rRNA cytosine-C5-methylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  210 bits (534), Expect = 8e-59
 Identities = 128/297 (43%), Positives = 164/297 (55%), Gaps = 17/297 (5%)

Query: 147 CPEWGAEGLHRRFGEDFPQEMAAMLTPAPLDLRVNPIKADRVQMLSALRALGLPAELSPL 206
           CP+W  +      G+ +  E AA+       LR N +K  R ++ + L A G+       
Sbjct: 136 CPDWLDKLGQAELGDTWAAERAALSLAPKRYLRTNGLKCTRDELATRLAAEGVQTVPVDG 195

Query: 207 SPYGIRVNERPALNRLAMLKTGELEIQDEGSQLVAVVVDAKPGERVVDFCAGAGGKTLAI 266
               + V    AL R      G  E QD GSQLVA  +D KPG RV+D CAGAGGKTL +
Sbjct: 196 VESALEVTSNAALFRTKAFADGWFEQQDAGSQLVAAALDVKPGMRVIDACAGAGGKTLHL 255

Query: 267 AAQMKNKGHVIACDVLENRLKRAAERFRRAGLHNIETRPLASETDRWVKRHKGGFDRVLV 326
           AA M  KG ++A DV + +L    ER RRAG HN+ETR +A    + +KR K   DR+L+
Sbjct: 256 AAAMTGKGRLLAMDVEQWKLDNLKERARRAGAHNVETRLIAGS--KTIKRLKLSADRLLL 313

Query: 327 DAPCSGTGTWRRNPDARWRVLGPGLDALLPLQARILASAARLVKPGGRLVYATCSLLAEE 386
           D PCSG G  +RNPDA+WR     L  L+ LQA IL S +R+VK GG LVYATCS++  E
Sbjct: 314 DVPCSGLGVLKRNPDAKWRDTEERLPVLMELQAHILGSYSRMVKVGGILVYATCSIMPCE 373

Query: 387 NEEQVAAFLAAHPAFRVVPLSEVAPQITGSAHPDYLALTPARHDTDGFFAAVLEREA 443
           N  QV AFLAA+P FR++    +               TPA    DGF+ A LER A
Sbjct: 374 NRGQVDAFLAANPNFRLLEDENI---------------TPATSGFDGFYLAKLERIA 415