Pairwise Alignments

Query, 247 a.a., ECF RNA polymerase sigma factor SigR from Xanthobacter sp. DMC5

Subject, 193 a.a., RNA polymerase sigma factor RpoE from Pseudomonas stutzeri RCH2

 Score =  102 bits (255), Expect = 4e-27
 Identities = 65/144 (45%), Positives = 82/144 (56%), Gaps = 11/144 (7%)

Query: 90  DADAAQDIVQDAYLRAYRAFADFKGGSA-RAWLLAIVRNC---HLTWRDLRRREMQRRAP 145
           D+  AQD+ Q+A+++AYRA A+F+G SA   WL  I  N    HL  R        RR P
Sbjct: 43  DSHEAQDVAQEAFIKAYRALANFRGDSAFYTWLYRIAINTAKNHLVARG-------RRPP 95

Query: 146 DAVAAEEGGDPEDAIDLLVDGETPETILLRRSQADRVRGTLELLPEPLREVLVLRELDEL 205
           D+  + E  +  +    L D E+PE  LLR    D V  T++LLPE LR  L LRE D L
Sbjct: 96  DSDVSSEDAEFYEGDHALKDIESPERSLLRDEIEDTVHRTIQLLPEDLRTALTLREFDGL 155

Query: 206 SYREIADVAGVPVGTVMSRLSRAR 229
           SY +IA V   PVGTV SR+ RAR
Sbjct: 156 SYEDIASVMQCPVGTVRSRIFRAR 179