Pairwise Alignments

Query, 247 a.a., ECF RNA polymerase sigma factor SigR from Xanthobacter sp. DMC5

Subject, 171 a.a., RNA polymerase sigma-E factor (sigma-24) protein from Sinorhizobium meliloti 1021

 Score = 67.8 bits (164), Expect = 1e-16
 Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 18/173 (10%)

Query: 63  ATEAAHFRASMLPHLDAAYTLARYLTRDADAAQDIVQDAYLRAYRAFADFKG-GSARAWL 121
           A E   FR  ++  L      A  L R+A+ A D+VQ+   RA      + G G   +W+
Sbjct: 4   AAEMKDFRRDLVSLLPKLRRFAITLARNANDADDLVQEVCERAIARSHLWNGEGRLESWV 63

Query: 122 LAIVRNCHLTWRD-LRRREMQRRAPDAVAAEEGGDPEDAIDLLVDGETPETILLRRSQAD 180
            A+ RN    W D +R+R++  R+  AV   E  +P             E    + + A+
Sbjct: 64  YAMTRNL---WVDEIRKRKV--RSAGAVDVFERDEPH-----------VEATAEKAAYAN 107

Query: 181 RVRGTLELLPEPLREVLVLRELDELSYREIADVAGVPVGTVMSRLSRARRHFA 233
           +V+  +  + E L  V +L  ++  SYRE A++ G+PVGTVMSRLS AR   A
Sbjct: 108 QVQKMILSMSEGLASVFLLVNVEGHSYRETAEILGIPVGTVMSRLSTARLRLA 160