Pairwise Alignments

Query, 832 a.a., Ribonuclease R from Xanthobacter sp. DMC5

Subject, 644 a.a., exoribonuclease II from Klebsiella michiganensis M5al

 Score =  200 bits (508), Expect = 2e-55
 Identities = 158/494 (31%), Positives = 239/494 (48%), Gaps = 26/494 (5%)

Query: 239 GAEHEAEDGDLVTVELMRQRVFGLPT--ARVKEKLGSLKSEKAVSLIAIHAHGIPNAFPD 296
           G EH+ ++GD    E+ R  + G     A + + +           + +  H +    PD
Sbjct: 117 GVEHDFKEGDWGVAEMRRHPLKGDRGFYAELTQYITYGDDHFVPWWVTLARHNLEKEAPD 176

Query: 297 VVLKEAEAAKQITVRG--REDWRDLPLVTIDPPDAKDHDDAVHAAADEDGGFIVTVAIAD 354
            V      A ++   G  R D  +L  VTID    +D DDA++   + DG   +TVAIAD
Sbjct: 177 GV------ATEMLDEGLERRDLTELAFVTIDSASTEDMDDALYVEQNADGKLHLTVAIAD 230

Query: 355 VSAYVRPGTALDREALIRGNSVYFPDRVVPMLPERISNDLCSLRPDEDRPALAVRLVIGG 414
            +A++  G+ LD  A IR  + Y P   +PMLP  +S+DLCSLRP+  RP LA R+++  
Sbjct: 231 PTAWIAEGSKLDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNAVRPVLACRMILAD 290

Query: 415 DGR-KRSHSFHRILMRSAGKLAYAQAQNAIEGRTDDITDPLVEGVLKPL-YAAYACVKKA 472
           DG  +    F    + S  KLAY    + +E   +    P  E V + +      C++++
Sbjct: 291 DGAIEDDIQFFAATIESKAKLAYDDVSDWLE--NNGSWQPDSETVARQIKLLQEVCLRRS 348

Query: 473 --RDARQPLDLDLPERKIILKPDGTVDRVVVPERLDAHRLIEEFMILANVAAAETLEEKK 530
             R     +  D P+ + +L   G V  +V   R  A+R++EE MI AN+ AA  L +K 
Sbjct: 349 EWRKNHALVFKDRPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKL 408

Query: 531 TPLIYRVHDGPTLAKLSALRDFLKTLDIGLPKTDQVRPSHFNRILEEVKDTDAAPLVNQV 590
              +Y VH G   A    L   LKT D+ +   + +    F ++  E+ D   +  ++  
Sbjct: 409 GFGVYNVHTGFDPANTEQLAALLKTHDVHVDPVEVLTLEGFCKLRREL-DAQPSGFLDSR 467

Query: 591 ILRSQSQAEYASENYGHFGLNLRRYAHFTSPIRRYADLIVHRGLVRALGVGKDGLPDDAT 650
           I R QS AE ++E   HFGL L  YA +TSPIR+Y D+I HR L++A+      +  +A 
Sbjct: 468 IRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINHR-LLKAI------IKGEAI 520

Query: 651 VESLGEVAAAISVTERRAMAAERETVDRLIAHHLADQIGAT--FNGRITGATKAGLFVAL 708
                +VA  ++   R    AER+  D L A +L  Q G T  F   I   ++ G+ V L
Sbjct: 521 SRPQDDVAIQMAERRRLNRMAERDVGDWLYARYLNPQAGTTTRFAAEIIDVSRGGMRVRL 580

Query: 709 DITGADGFIPASTL 722
              GA  FIPA  L
Sbjct: 581 VDNGAVAFIPAPFL 594