Pairwise Alignments

Query, 183 a.a., Ribosomal RNA small subunit methyltransferase D from Xanthobacter sp. DMC5

Subject, 203 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score = 95.5 bits (236), Expect = 5e-25
 Identities = 61/155 (39%), Positives = 82/155 (52%), Gaps = 5/155 (3%)

Query: 1   MRIVGGRLKGRALKGPSSSLTRPTSDRLRESLFNMLAHAYGDPCDGARVLDLFAGTGALG 60
           +RI+GG  + R L  P +   RPT DR+RE+LFN LA        GARVLD FAG+GAL 
Sbjct: 19  LRIIGGEWRSRRLSFPDAPGLRPTPDRVRETLFNWLAPYVA----GARVLDPFAGSGALF 74

Query: 61  IEALSRGARFALFVEEAAEARGLIRDNVEALGLTGVTKVFRRDATSLGPMGPGEPYGLVF 120
           +EALSRGA     ++ +  A   +++++  L  T V +V   DA       P  P+ LVF
Sbjct: 75  LEALSRGASMGQALDASNLAVSSLKEHLGTLRCT-VGQVQTADALRYLDSQPATPFDLVF 133

Query: 121 CDPPYGKGLAEQAIAAAVEGGWLTADALLIIEERT 155
            DPP+ + L         E  WL  DA +  E  T
Sbjct: 134 LDPPFNQNLLPTVCTLLEERQWLAEDAWVYTESET 168