Pairwise Alignments

Query, 183 a.a., Ribosomal RNA small subunit methyltransferase D from Xanthobacter sp. DMC5

Subject, 726 a.a., Predicted N6-adenine-specific DNA methylase from Pseudomonas stutzeri RCH2

 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 19/49 (38%), Positives = 27/49 (55%)

Query: 85  RDNVEALGLTGVTKVFRRDATSLGPMGPGEPYGLVFCDPPYGKGLAEQA 133
           R+N+E  GL    KV++ D     P       GLV C+PPYG+ L ++A
Sbjct: 279 RNNIERAGLASWIKVYQGDVGDFEPRPDQNQKGLVICNPPYGERLGDEA 327



 Score = 32.3 bits (72), Expect = 2e-05
 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 1/79 (1%)

Query: 46  GARVLDLFAGTGALGIEALSRGARFALFVEEAAEARGLIRDNVEALGLTGVTKVFRRDAT 105
           G R L+LF  T    + A   GAR    V+ +       R N+   GL+   ++ + D  
Sbjct: 566 GKRFLNLFCYTATATVHAAKGGARSTTSVDLSKTYLDWARRNLALNGLSDRQRLEQGDVM 625

Query: 106 SLGPMGPGEPYGLVFCDPP 124
           +      GE Y L+F DPP
Sbjct: 626 AWLEEDRGE-YDLIFIDPP 643