Pairwise Alignments

Query, 205 a.a., 30S ribosomal protein S4 from Xanthobacter sp. DMC5

Subject, 206 a.a., 30S ribosomal protein S4 (RefSeq) from Shewanella loihica PV-4

 Score =  152 bits (385), Expect = 3e-42
 Identities = 93/212 (43%), Positives = 134/212 (63%), Gaps = 13/212 (6%)

Query: 1   MSKRIAAKHKIDRRMGENIWGRPKSPVN------RREYGPGQHGQRRKGKLSDFGVQLRA 54
           M++ +  K K+ RR G +++   KS V       + E  PGQHG R K +LS++GVQLR 
Sbjct: 1   MARYLGPKLKLTRREGTDLF--LKSGVRAIDSKCKLEAAPGQHGAR-KARLSEYGVQLRE 57

Query: 55  KQKLKGYYGSIGEKQFHKVYVEASRLKGDTGANLIGLLERRLDAVVYRAKFVPTIFAARQ 114
           KQK++  YG + EKQF   Y +A+RLKG+TG NL+ LLE RLD VVYR  F  T   ARQ
Sbjct: 58  KQKVRRTYGVL-EKQFRNYYKDAARLKGNTGENLLTLLETRLDNVVYRMGFGATRAEARQ 116

Query: 115 FVSHGHVKVNGKRVNIPSYLVKVDDVIEVKEASRQLAIVIEAQQLA-ERDVPDYIELDTH 173
            VSH  + VNG+ VNIPS+ V  +DVI V+E S++ A +  A ++A +R+ P ++E+D  
Sbjct: 117 LVSHKSIMVNGRVVNIPSFKVSANDVISVREKSQKQARIKAALEVASQREKPTWVEVDAA 176

Query: 174 KLTARFARIPELNEVPYPVQMEPNLVVEFYSR 205
           K+   F R+PE +++     +   L+VE YS+
Sbjct: 177 KMEGAFKRLPERSDL--SADINEQLIVELYSK 206