Pairwise Alignments

Query, 816 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Xanthobacter sp. DMC5

Subject, 824 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  522 bits (1344), Expect = e-152
 Identities = 310/837 (37%), Positives = 482/837 (57%), Gaps = 109/837 (13%)

Query: 4   FSRSLEQSLHRALALANERH----HEYATLEHLLLSLVDDQD--AAAVMRACNVDMEKLR 57
           F R  E+++ + + LA E      H +   E +LL L+ +    AA V+++  V+++  R
Sbjct: 2   FERFTEKAI-KVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60

Query: 58  RNLIEYVDTELENLVQSGSD----DSKPTAGFQRVIQRAVIHVQSSGREEVTGANVLVAI 113
                    E+E ++  GS     +   T   +RV++ ++   +  G   +   ++L+ +
Sbjct: 61  --------IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGL 112

Query: 114 FAERESHAAYFLQEQDMTRYDAVNYISHGIAKRSGMSESRPVRGADEETETKSGDDKQKK 173
             E E  AA  L+               G+      ++   + G   E  T  G  + K 
Sbjct: 113 IREGEGVAARVLENL-------------GVDLSKVRTQVIRMLGETAEVSTGGGQGRTK- 158

Query: 174 ADALDAYCINLNKKAHEGKIDPLIGRDSEITRTIQVLCRRQKNNPLFVGDPGVGKTAIAE 233
              LD +  NL ++A +GK+DP++GR  EI R IQ+L RR KNNP+ +G+PGVGKTAIAE
Sbjct: 159 TPTLDEFGSNLTQQAADGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAE 218

Query: 234 GLAKRINDGEVPEVLATATVFALDMGALLAGTRYRGDFEERLKQVVKEIEAYPNAIMFID 293
           GLA+RI  G++P++L    V  LD+G L+AGT+YRG+FEERLK+++ EI +  N I+ ID
Sbjct: 219 GLAQRIATGDIPDILEDKRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVID 278

Query: 294 EIHTVIGAGATSGGAMDASNLLKPALASGSLRCMGSTTYKEYRQYFEKDRALVRRFQKID 353
           E+HT+IGAGA   GA+DA+N+LKPALA G L+C+G+TT  EYR++ E+D AL RRFQ + 
Sbjct: 279 EVHTLIGAGAAE-GAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVM 337

Query: 354 VAEPTVPDAIEILKGLKPYFEDYHKLRYTNDAIKAAVELSARYIHDRKLPDKAIDVIDES 413
           V EP+V D IEIL+GL+  +E +HKL+  ++A++AA +L+ RYI DR LPDKAID+IDE+
Sbjct: 338 VGEPSVDDTIEILRGLRERYEQHHKLKIADEALEAAAKLADRYISDRFLPDKAIDLIDEA 397

Query: 414 GAAQMLL-----PEAKR---------------------KKTIGLKEIEATIATMAR---- 443
           G+   L+     P AK                       K   L++ E  I T  R    
Sbjct: 398 GSRVRLMNSQLPPAAKELDKELRQVLKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQ 457

Query: 444 ------------------------------IPPKTVSKDDAEVLANLQTTLKRVVYGQNK 473
                                         +P   +++ ++  L N++ TL   + GQ++
Sbjct: 458 SKKADGTSSTDDSPIVTEEDIAHIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDE 517

Query: 474 AIEALSASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAS-ILGVQ--LLRFDMS 530
           A++A+S +I+ AR GL+ P +PI  ++FSGPTGVGKTE+ K LA+   G +  ++R DMS
Sbjct: 518 AVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMS 577

Query: 531 EYMERHTVSRLIGAPPGYVGFDQGGLLTDGVDQNPHCVLLLDEIEKAHPDLFNILLQVMD 590
           EYMERHTVS+LIG+PPGYVG+++GG LT+ V + P+ V+LLDEIEKAHPD+FN+LLQ+++
Sbjct: 578 EYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLE 637

Query: 591 HGKLTDHNGKQIDFRNVILIMTTNAGAADLAKPAYGFTRQKREGDD------------SE 638
            G+LTD  G+ +DF+N ++I+T+N G+  + K   G   +    D+            +E
Sbjct: 638 DGRLTDAKGRTVDFKNTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNE 697

Query: 639 AISRTFAPEFRNRLDAVIPFGHLPPEVITQVVEKFVLQLEAQLADRNVTIELSDEAGTWL 698
            + + F PEF NRLD +I F  L  E + ++ +  + ++  ++ ++ +++ ++++    L
Sbjct: 698 ELKQYFRPEFLNRLDEIIVFRQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRL 757

Query: 699 VDRGYDEQMGARPMARVIQEFIKTPLADLVLFGALKNGGHVRVVVEGEGKDSKLGFE 755
           V+ GY+   GARP+ R I   ++  LA+  L G L+ G    V +  EGK   L  E
Sbjct: 758 VEEGYNPSYGARPLRRAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKVQVLAQE 814