Pairwise Alignments

Query, 403 a.a., Coupling protein VirD4, ATPase required for T-DNA transfer from Xanthomonas campestris pv. campestris strain 8004

Subject, 649 a.a., conjugal transfer protein TraG from Dickeya dianthicola 67-19

 Score =  105 bits (262), Expect = 4e-27
 Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 10/255 (3%)

Query: 143 TAFDNLLSQAEETFASIMGTFKEPLNQFINPILDASTSDNDFLLTDV--RKKKMSIYIGI 200
           +A   +L++++   + ++ T    L  + +P + A TS  D+ + D+      +S+Y+ +
Sbjct: 306 SAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAAVTSRCDWRIADLIAAHHPVSLYLVV 365

Query: 201 QPNKLAESRLLINLLFSQLINLNTKELPQ-NNPVLEHQCLLLMDEFTSIGRVDIIASAVS 259
            P+ ++ ++ LI L+ +Q+    T+ L   +     H  LL++DEF ++GR+D   SA++
Sbjct: 366 PPSDISRTKPLIRLILNQIGRRLTESLEDADGSTRRHTLLLMLDEFPALGRLDFFESALA 425

Query: 260 YMAGYNIRLLPIIQSMAQLDATYGKDVSRTIITNHALQIVYAPREQQDANDYSDMLGYTT 319
           +MAGY +R   I QS+ Q+D  YG   +  I+ N  +++ +A  +++ A   SD LG  T
Sbjct: 426 FMAGYGLRAFLIAQSLNQIDKAYGP--NHAILDNCHVRVAFATNDERTAKRISDTLGTAT 483

Query: 320 VRKKNKSQTSGKQS----SVSYSETEQRRALMLPQELKAMGFDKEVFLYEGIPSPVLCEK 375
             +  ++    + +     +  +  E  R L+ P E+  +     + +  G   P+   K
Sbjct: 484 ELRAQRNYAGHRLAPWLGHLMIARQESARPLLTPGEVMQLPASDAIVMV-GSQPPIRARK 542

Query: 376 IKYYEDAYFTKRLLP 390
           ++Y+ DA F  R+LP
Sbjct: 543 MRYFADANFQSRVLP 557