Pairwise Alignments

Query, 865 a.a., histidine kinase/response regulator hybrid protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  142 bits (357), Expect = 1e-37
 Identities = 173/670 (25%), Positives = 279/670 (41%), Gaps = 82/670 (12%)

Query: 223 QHF-DLYAADGSTVLPTDAIPLVRAWRGEHVRNA--------------ELVIRAT-GQPP 266
           QHF D++   GS V+   ++ L   W     R+               E+  RAT G+  
Sbjct: 186 QHFEDMFGWPGSQVIGKTSLEL-GLWVNPEQRHQIVESTRANGGPLIMEVQFRATSGKVH 244

Query: 267 RSVLCNADPIDGDHGVALGAVCVMH----DITQLKDASAALAAERARLQALVDASRDVAI 322
             +LC         G+ L  V  +     D T+ K A  AL   + RL   +D+++    
Sbjct: 245 DGILCT-------QGIELEGVTFLISTFVDTTERKRAEQALKDSQERLDLALDSAQ---- 293

Query: 323 IVFDPLGHIEVFNPGAERLLGYTAAEVMGQCPTQFHLP-----EELARHRATLAVPAPSY 377
                LG  +   P         AA++ G  P  FH       E +  H       A  Y
Sbjct: 294 -----LGTWDWHIPSGMLYGSARAAQLHGLPPIPFHESFDAFFEGVPEHERNSMRQA--Y 346

Query: 378 VALAAAAAGDLLEQEVWTLLRKDGSQRRVRLSFNVIQDAQQGLTGYLAMAIDVTAELQAQ 437
            +L    AG+   Q  + +  ++G+ R +     + +D Q          +D+T +++ +
Sbjct: 347 RSLREGPAGNY--QITYRVQLENGTSRYIESRARLYRDDQGIPLRMAGTLLDITDQVERE 404

Query: 438 AAAQLAAKRFSGAFDTAPQGMAIVSLE-GRWSEINSALCTLLGYSRTQLLGMTFQDVTHP 496
                + ++F+  F  +P  + +   + G++ EIN A     G+S  Q+LG T +++   
Sbjct: 405 QRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEEI--- 461

Query: 497 DDLDVDLALLGELLD-GKRNSYTLSKRYVS--------RQGAVLWTLLSVSLVRDSDGAP 547
                   L  E ++  KR    + ++ +S        R G  L  ++S  L+   D  P
Sbjct: 462 -------GLWAESVERAKRIEQVIREQALSNVAVVLNHRNGDPLTCVISSRLITVDD-QP 513

Query: 548 VHFVSQVLDVTEQHVAAERLAESEARLRAISDATPTLVSQFDA-AQRCLFANEAHRSWLG 606
              V+ + D+T+Q  A   L  SE +      ++P  ++  +  + R L  N+      G
Sbjct: 514 CS-VTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTG 572

Query: 607 VDPNSLVGCHITRLLGDDLGEPVYAALAAAARGERATFDYVLQAGASARD----VEITLV 662
              + ++G H    +G    +   +AL A  R ER    +    G + R     VE+++ 
Sbjct: 573 YSTDEVIG-HTVYEIGIWADDKQRSALLAELR-ERGRVHHREMLGRNKRGDILTVEVSVE 630

Query: 663 PATKGTQAQVQGFFLMAQDVTAHKTLHRLMHERATRDALTGLPNRHAWSEALHTAVTHAQ 722
           P T     +V    L A+DV+  K     +   A  D LT LPNR    + L   +   +
Sbjct: 631 PITLN---EVDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLK 687

Query: 723 QQHTAVAVMFLDLDGFKRINDVHGHRAGDAVLVAFGRCLQQAVGTRYLVARLAGDEFVVL 782
           + +   A++FLDLD FK IND  GH  GD VL      L+ +V     VARL GDEFVVL
Sbjct: 688 RHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVL 747

Query: 783 LDDLHAP----ERECAAVAERIRNAVAAGTTFGEQWLPIQPSIGVAWQRGSTADTASLMH 838
           L  L       E +   +A+ +R  +A   +   Q L + PSIGVA         A L+ 
Sbjct: 748 LSGLEGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLK 807

Query: 839 AADEAMYAAK 848
            AD A+Y AK
Sbjct: 808 RADIALYRAK 817